Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNRPFP62306 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNRPFP62306 AGGF1P2-201ENST00000426656 2106 ntBASIC18.43■□□□□ 0.54
SNRPFP62306 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SNRPFP62306 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.43■□□□□ 0.54
SNRPFP62306 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SNRPFP62306 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.42■□□□□ 0.54
SNRPFP62306 AC006538.1-201ENST00000567905 1585 ntBASIC18.42■□□□□ 0.54
SNRPFP62306 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SNRPFP62306 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.42■□□□□ 0.54
SNRPFP62306 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SNRPFP62306 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNRPFP62306 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SNRPFP62306 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNRPFP62306 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNRPFP62306 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SNRPFP62306 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SNRPFP62306 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SNRPFP62306 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.42■□□□□ 0.54
SNRPFP62306 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SNRPFP62306 PMS2P1-201ENST00000431037 1228 ntBASIC18.42■□□□□ 0.54
SNRPFP62306 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.42■□□□□ 0.54
SNRPFP62306 RPL13AP23-201ENST00000480739 586 ntBASIC18.42■□□□□ 0.54
SNRPFP62306 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.42■□□□□ 0.54
SNRPFP62306 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.42■□□□□ 0.54
SNRPFP62306 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.42■□□□□ 0.54
SNRPFP62306 AC096734.2-201ENST00000562054 433 ntBASIC18.42■□□□□ 0.54
SNRPFP62306 AC034105.1-201ENST00000563488 319 ntBASIC18.42■□□□□ 0.54
SNRPFP62306 MIR4515-201ENST00000584082 81 ntBASIC18.42■□□□□ 0.54
SNRPFP62306 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.42■□□□□ 0.54
SNRPFP62306 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.42■□□□□ 0.54
SNRPFP62306 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SNRPFP62306 NKILA-202ENST00000614771 2598 ntBASIC18.42■□□□□ 0.54
SNRPFP62306 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SNRPFP62306 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNRPFP62306 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNRPFP62306 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNRPFP62306 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.41■□□□□ 0.54
SNRPFP62306 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRPFP62306 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SNRPFP62306 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNRPFP62306 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SNRPFP62306 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNRPFP62306 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRPFP62306 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRPFP62306 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNRPFP62306 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRPFP62306 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNRPFP62306 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRPFP62306 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRPFP62306 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRPFP62306 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SNRPFP62306 AL590627.1-203ENST00000421194 1026 ntBASIC18.41■□□□□ 0.54
SNRPFP62306 RHOQP3-201ENST00000437982 621 ntBASIC18.41■□□□□ 0.54
SNRPFP62306 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.41■□□□□ 0.54
SNRPFP62306 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.41■□□□□ 0.54
SNRPFP62306 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRPFP62306 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.41■□□□□ 0.54
SNRPFP62306 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.41■□□□□ 0.54
SNRPFP62306 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SNRPFP62306 AL645728.2-201ENST00000641974 660 ntBASIC18.41■□□□□ 0.54
SNRPFP62306 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRPFP62306 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SNRPFP62306 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNRPFP62306 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRPFP62306 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SNRPFP62306 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNRPFP62306 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.41■□□□□ 0.54
SNRPFP62306 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRPFP62306 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRPFP62306 KRT8P39-201ENST00000396270 1433 ntBASIC18.4■□□□□ 0.54
SNRPFP62306 PCDHA12-202ENST00000613593 2588 ntBASIC18.4■□□□□ 0.54
SNRPFP62306 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SNRPFP62306 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRPFP62306 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRPFP62306 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNRPFP62306 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRPFP62306 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRPFP62306 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRPFP62306 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
SNRPFP62306 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNRPFP62306 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRPFP62306 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRPFP62306 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRPFP62306 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
SNRPFP62306 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.4■□□□□ 0.54
SNRPFP62306 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.4■□□□□ 0.54
SNRPFP62306 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.4■□□□□ 0.54
SNRPFP62306 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.4■□□□□ 0.54
SNRPFP62306 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRPFP62306 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRPFP62306 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.4■□□□□ 0.54
SNRPFP62306 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.4■□□□□ 0.54
SNRPFP62306 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SNRPFP62306 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.4■□□□□ 0.54
SNRPFP62306 CYP2A7P1-201ENST00000595391 815 ntBASIC18.4■□□□□ 0.54
SNRPFP62306 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRPFP62306 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.4■□□□□ 0.54
SNRPFP62306 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.4■□□□□ 0.54
SNRPFP62306 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms