Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC12.65□□□□□ -0.38
CMC4P56277 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC12.65□□□□□ -0.38
CMC4P56277 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CMC4P56277 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC12.65□□□□□ -0.38
CMC4P56277 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CMC4P56277 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CMC4P56277 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CMC4P56277 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CMC4P56277 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.65□□□□□ -0.38
CMC4P56277 CXCL1P1-201ENST00000502804 216 ntBASIC12.65□□□□□ -0.38
CMC4P56277 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CMC4P56277 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.65□□□□□ -0.38
CMC4P56277 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CMC4P56277 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.65□□□□□ -0.38
CMC4P56277 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.65□□□□□ -0.38
CMC4P56277 AC096734.2-201ENST00000562054 433 ntBASIC12.65□□□□□ -0.38
CMC4P56277 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
CMC4P56277 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CMC4P56277 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CMC4P56277 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CMC4P56277 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CMC4P56277 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CMC4P56277 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CMC4P56277 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.65□□□□□ -0.38
CMC4P56277 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.65□□□□□ -0.38
CMC4P56277 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC12.65□□□□□ -0.38
CMC4P56277 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CMC4P56277 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CMC4P56277 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
CMC4P56277 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.64□□□□□ -0.39
CMC4P56277 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CMC4P56277 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CMC4P56277 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CMC4P56277 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CMC4P56277 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CMC4P56277 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CMC4P56277 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.64□□□□□ -0.39
CMC4P56277 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CMC4P56277 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC12.64□□□□□ -0.39
CMC4P56277 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CMC4P56277 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.64□□□□□ -0.39
CMC4P56277 AR-207ENST00000612010 3896 ntTSL 5 BASIC12.64□□□□□ -0.39
CMC4P56277 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CMC4P56277 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CMC4P56277 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.64□□□□□ -0.39
CMC4P56277 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CMC4P56277 SLC25A1P3-201ENST00000395415 828 ntBASIC12.64□□□□□ -0.39
CMC4P56277 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CMC4P56277 PMS2P1-201ENST00000431037 1228 ntBASIC12.64□□□□□ -0.39
CMC4P56277 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.64□□□□□ -0.39
CMC4P56277 FAM185BP-201ENST00000443595 716 ntBASIC12.64□□□□□ -0.39
CMC4P56277 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.64□□□□□ -0.39
CMC4P56277 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.64□□□□□ -0.39
CMC4P56277 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC12.64□□□□□ -0.39
CMC4P56277 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.64□□□□□ -0.39
CMC4P56277 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC12.64□□□□□ -0.39
CMC4P56277 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
CMC4P56277 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.64□□□□□ -0.39
CMC4P56277 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CMC4P56277 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CMC4P56277 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CMC4P56277 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.64□□□□□ -0.39
CMC4P56277 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CMC4P56277 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.64□□□□□ -0.39
CMC4P56277 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CMC4P56277 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC12.64□□□□□ -0.39
CMC4P56277 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CMC4P56277 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CMC4P56277 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CMC4P56277 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CMC4P56277 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CMC4P56277 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CMC4P56277 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.64□□□□□ -0.39
CMC4P56277 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CMC4P56277 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CMC4P56277 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CMC4P56277 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.64□□□□□ -0.39
CMC4P56277 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CMC4P56277 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CMC4P56277 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CMC4P56277 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CMC4P56277 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CMC4P56277 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC12.63□□□□□ -0.39
CMC4P56277 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
CMC4P56277 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CMC4P56277 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC12.63□□□□□ -0.39
CMC4P56277 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC12.63□□□□□ -0.39
CMC4P56277 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CMC4P56277 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CMC4P56277 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CMC4P56277 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CMC4P56277 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CMC4P56277 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.63□□□□□ -0.39
CMC4P56277 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.63□□□□□ -0.39
CMC4P56277 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CMC4P56277 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC12.63□□□□□ -0.39
CMC4P56277 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CMC4P56277 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.63□□□□□ -0.39
CMC4P56277 AL022342.1-201ENST00000400363 863 ntBASIC12.63□□□□□ -0.39
CMC4P56277 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms