Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH8P55286 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CDH8P55286 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH8P55286 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH8P55286 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH8P55286 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH8P55286 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH8P55286 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH8P55286 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.1■□□□□ 0.49
CDH8P55286 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH8P55286 KRT8P49-201ENST00000604166 1432 ntBASIC18.1■□□□□ 0.49
CDH8P55286 TOP3BP1-201ENST00000420768 1380 ntBASIC18.1■□□□□ 0.49
CDH8P55286 AL021920.2-201ENST00000624828 1351 ntBASIC18.1■□□□□ 0.49
CDH8P55286 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH8P55286 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.1■□□□□ 0.49
CDH8P55286 AC023274.1-201ENST00000418278 595 ntBASIC18.1■□□□□ 0.49
CDH8P55286 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH8P55286 RHOQP3-201ENST00000437982 621 ntBASIC18.1■□□□□ 0.49
CDH8P55286 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH8P55286 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH8P55286 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH8P55286 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
CDH8P55286 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH8P55286 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH8P55286 AC096734.2-201ENST00000562054 433 ntBASIC18.1■□□□□ 0.49
CDH8P55286 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH8P55286 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.1■□□□□ 0.49
CDH8P55286 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH8P55286 AC092865.6-201ENST00000642101 219 ntBASIC18.1■□□□□ 0.49
CDH8P55286 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH8P55286 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CDH8P55286 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH8P55286 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH8P55286 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CDH8P55286 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH8P55286 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDH8P55286 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH8P55286 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH8P55286 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH8P55286 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH8P55286 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH8P55286 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH8P55286 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CDH8P55286 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH8P55286 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH8P55286 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH8P55286 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH8P55286 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH8P55286 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.09■□□□□ 0.49
CDH8P55286 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
CDH8P55286 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH8P55286 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CDH8P55286 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH8P55286 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.09■□□□□ 0.49
CDH8P55286 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH8P55286 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.09■□□□□ 0.49
CDH8P55286 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH8P55286 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH8P55286 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH8P55286 AL513190.1-201ENST00000621254 727 ntBASIC18.09■□□□□ 0.49
CDH8P55286 AC004877.2-201ENST00000623941 599 ntBASIC18.09■□□□□ 0.49
CDH8P55286 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH8P55286 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH8P55286 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CDH8P55286 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH8P55286 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH8P55286 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CDH8P55286 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH8P55286 SLC22A20-204ENST00000530038 1673 ntBASIC18.09■□□□□ 0.49
CDH8P55286 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CDH8P55286 AL121761.2-201ENST00000598007 1648 ntBASIC18.09■□□□□ 0.49
CDH8P55286 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH8P55286 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH8P55286 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.08■□□□□ 0.49
CDH8P55286 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH8P55286 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.08■□□□□ 0.49
CDH8P55286 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH8P55286 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
CDH8P55286 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH8P55286 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.08■□□□□ 0.49
CDH8P55286 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDH8P55286 RNF216P1-203ENST00000404404 2427 ntBASIC18.08■□□□□ 0.49
CDH8P55286 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.08■□□□□ 0.49
CDH8P55286 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDH8P55286 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH8P55286 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH8P55286 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CDH8P55286 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH8P55286 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH8P55286 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CDH8P55286 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.08■□□□□ 0.48
CDH8P55286 AL513480.1-201ENST00000451731 511 ntBASIC18.08■□□□□ 0.48
CDH8P55286 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH8P55286 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH8P55286 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
CDH8P55286 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CDH8P55286 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH8P55286 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH8P55286 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH8P55286 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms