Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PMS1P54277 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
PMS1P54277 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMS1P54277 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PMS1P54277 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PMS1P54277 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMS1P54277 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMS1P54277 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMS1P54277 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMS1P54277 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.69■□□□□ 0.58
PMS1P54277 KRT8P49-201ENST00000604166 1432 ntBASIC18.69■□□□□ 0.58
PMS1P54277 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
PMS1P54277 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
PMS1P54277 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMS1P54277 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMS1P54277 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PMS1P54277 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PMS1P54277 PAWRP1-201ENST00000451083 565 ntBASIC18.69■□□□□ 0.58
PMS1P54277 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PMS1P54277 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.69■□□□□ 0.58
PMS1P54277 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.69■□□□□ 0.58
PMS1P54277 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.69■□□□□ 0.58
PMS1P54277 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMS1P54277 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMS1P54277 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMS1P54277 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PMS1P54277 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PMS1P54277 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMS1P54277 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMS1P54277 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMS1P54277 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PMS1P54277 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMS1P54277 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.69■□□□□ 0.58
PMS1P54277 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
PMS1P54277 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMS1P54277 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.69■□□□□ 0.58
PMS1P54277 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PMS1P54277 AC005052.1-201ENST00000625181 2492 ntBASIC18.68■□□□□ 0.58
PMS1P54277 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.68■□□□□ 0.58
PMS1P54277 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMS1P54277 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.68■□□□□ 0.58
PMS1P54277 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMS1P54277 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.68■□□□□ 0.58
PMS1P54277 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.68■□□□□ 0.58
PMS1P54277 UNC93B7-201ENST00000509439 705 ntBASIC18.68■□□□□ 0.58
PMS1P54277 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.68■□□□□ 0.58
PMS1P54277 AC021087.4-201ENST00000563761 564 ntBASIC18.68■□□□□ 0.58
PMS1P54277 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PMS1P54277 CLEC4GP1-201ENST00000596555 870 ntBASIC18.68■□□□□ 0.58
PMS1P54277 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.68■□□□□ 0.58
PMS1P54277 AC004706.3-202ENST00000621574 984 ntBASIC18.68■□□□□ 0.58
PMS1P54277 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.68■□□□□ 0.58
PMS1P54277 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.68■□□□□ 0.58
PMS1P54277 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PMS1P54277 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMS1P54277 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMS1P54277 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.68■□□□□ 0.58
PMS1P54277 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
PMS1P54277 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMS1P54277 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMS1P54277 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMS1P54277 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PMS1P54277 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PMS1P54277 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMS1P54277 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.68■□□□□ 0.58
PMS1P54277 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMS1P54277 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMS1P54277 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMS1P54277 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PMS1P54277 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMS1P54277 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMS1P54277 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PMS1P54277 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PMS1P54277 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PMS1P54277 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PMS1P54277 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.67■□□□□ 0.58
PMS1P54277 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.67■□□□□ 0.58
PMS1P54277 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.67■□□□□ 0.58
PMS1P54277 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.67■□□□□ 0.58
PMS1P54277 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PMS1P54277 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.67■□□□□ 0.58
PMS1P54277 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.67■□□□□ 0.58
PMS1P54277 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.67■□□□□ 0.58
PMS1P54277 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.67■□□□□ 0.58
PMS1P54277 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PMS1P54277 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.67■□□□□ 0.58
PMS1P54277 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.67■□□□□ 0.58
PMS1P54277 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PMS1P54277 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PMS1P54277 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PMS1P54277 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PMS1P54277 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PMS1P54277 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PMS1P54277 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PMS1P54277 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PMS1P54277 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PMS1P54277 AL021920.2-201ENST00000624828 1351 ntBASIC18.67■□□□□ 0.58
PMS1P54277 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.66■□□□□ 0.58
PMS1P54277 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PMS1P54277 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms