Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.75■□□□□ 0.59
BRCA2P51587 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.75■□□□□ 0.59
BRCA2P51587 SNX1-214ENST00000625244 324 ntTSL 5 BASIC18.75■□□□□ 0.59
BRCA2P51587 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BRCA2P51587 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.75■□□□□ 0.59
BRCA2P51587 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.75■□□□□ 0.59
BRCA2P51587 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRCA2P51587 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.75■□□□□ 0.59
BRCA2P51587 AC098850.1-201ENST00000419919 790 ntBASIC18.75■□□□□ 0.59
BRCA2P51587 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.75■□□□□ 0.59
BRCA2P51587 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC18.75■□□□□ 0.59
BRCA2P51587 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.75■□□□□ 0.59
BRCA2P51587 PPA1-206ENST00000625364 644 ntTSL 5 BASIC18.75■□□□□ 0.59
BRCA2P51587 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.75■□□□□ 0.59
BRCA2P51587 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRCA2P51587 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRCA2P51587 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BRCA2P51587 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.75■□□□□ 0.59
BRCA2P51587 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.75■□□□□ 0.59
BRCA2P51587 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BRCA2P51587 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BRCA2P51587 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
BRCA2P51587 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRCA2P51587 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
BRCA2P51587 AC018665.1-201ENST00000622927 1362 ntBASIC18.75■□□□□ 0.59
BRCA2P51587 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.75■□□□□ 0.59
BRCA2P51587 AC023310.3-201ENST00000557027 670 ntBASIC18.75■□□□□ 0.59
BRCA2P51587 AC100756.1-201ENST00000562736 682 ntBASIC18.75■□□□□ 0.59
BRCA2P51587 AC138749.3-201ENST00000567691 622 ntBASIC18.75■□□□□ 0.59
BRCA2P51587 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.75■□□□□ 0.59
BRCA2P51587 AC116165.1-201ENST00000611806 668 ntBASIC18.75■□□□□ 0.59
BRCA2P51587 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.75■□□□□ 0.59
BRCA2P51587 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.75■□□□□ 0.59
BRCA2P51587 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.75■□□□□ 0.59
BRCA2P51587 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRCA2P51587 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
BRCA2P51587 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRCA2P51587 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRCA2P51587 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
BRCA2P51587 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
BRCA2P51587 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRCA2P51587 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.74■□□□□ 0.59
BRCA2P51587 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRCA2P51587 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.74■□□□□ 0.59
BRCA2P51587 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRCA2P51587 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRCA2P51587 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.74■□□□□ 0.59
BRCA2P51587 AC106820.2-201ENST00000563775 3264 ntBASIC18.74■□□□□ 0.59
BRCA2P51587 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.74■□□□□ 0.59
BRCA2P51587 AL671710.1-201ENST00000610245 2349 ntBASIC18.74■□□□□ 0.59
BRCA2P51587 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRCA2P51587 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.74■□□□□ 0.59
BRCA2P51587 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRCA2P51587 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
BRCA2P51587 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.74■□□□□ 0.59
BRCA2P51587 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRCA2P51587 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.74■□□□□ 0.59
BRCA2P51587 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.74■□□□□ 0.59
BRCA2P51587 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.74■□□□□ 0.59
BRCA2P51587 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
BRCA2P51587 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.73■□□□□ 0.59
BRCA2P51587 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BRCA2P51587 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BRCA2P51587 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
BRCA2P51587 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCA2P51587 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
BRCA2P51587 ELK2AP-201ENST00000392510 1007 ntBASIC18.73■□□□□ 0.59
BRCA2P51587 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.73■□□□□ 0.59
BRCA2P51587 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCA2P51587 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.73■□□□□ 0.59
BRCA2P51587 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.73■□□□□ 0.59
BRCA2P51587 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.73■□□□□ 0.59
BRCA2P51587 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCA2P51587 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.73■□□□□ 0.59
BRCA2P51587 AC131009.4-201ENST00000624048 1740 ntBASIC18.73■□□□□ 0.59
BRCA2P51587 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.73■□□□□ 0.59
BRCA2P51587 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCA2P51587 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.73■□□□□ 0.59
BRCA2P51587 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCA2P51587 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.73■□□□□ 0.59
BRCA2P51587 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.73■□□□□ 0.59
BRCA2P51587 DOC2GP-202ENST00000514950 1163 ntBASIC18.73■□□□□ 0.59
BRCA2P51587 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.73■□□□□ 0.59
BRCA2P51587 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCA2P51587 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCA2P51587 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCA2P51587 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCA2P51587 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.73■□□□□ 0.59
BRCA2P51587 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.73■□□□□ 0.59
BRCA2P51587 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.73■□□□□ 0.59
BRCA2P51587 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.73■□□□□ 0.59
BRCA2P51587 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCA2P51587 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
BRCA2P51587 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
BRCA2P51587 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BRCA2P51587 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRCA2P51587 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BRCA2P51587 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRCA2P51587 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.72■□□□□ 0.59
BRCA2P51587 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms