Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2AP49459 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2AP49459 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2AP49459 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2AP49459 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2AP49459 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
UBE2AP49459 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
UBE2AP49459 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2AP49459 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2AP49459 AL596257.1-201ENST00000641463 2694 ntBASIC10.84□□□□□ -0.67
UBE2AP49459 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC10.84□□□□□ -0.67
UBE2AP49459 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2AP49459 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2AP49459 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2AP49459 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2AP49459 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
UBE2AP49459 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2AP49459 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2AP49459 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2AP49459 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
UBE2AP49459 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2AP49459 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2AP49459 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
UBE2AP49459 AL121761.2-201ENST00000598007 1648 ntBASIC10.84□□□□□ -0.67
UBE2AP49459 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2AP49459 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2AP49459 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2AP49459 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2AP49459 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2AP49459 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2AP49459 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2AP49459 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2AP49459 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2AP49459 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2AP49459 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2AP49459 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2AP49459 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC10.83□□□□□ -0.68
UBE2AP49459 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2AP49459 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC10.83□□□□□ -0.68
UBE2AP49459 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2AP49459 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC10.83□□□□□ -0.68
UBE2AP49459 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2AP49459 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2AP49459 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC10.83□□□□□ -0.68
UBE2AP49459 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2AP49459 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2AP49459 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2AP49459 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2AP49459 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2AP49459 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2AP49459 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2AP49459 CHCHD2P8-201ENST00000429873 447 ntBASIC10.83□□□□□ -0.68
UBE2AP49459 AC103564.2-201ENST00000432853 1299 ntBASIC10.83□□□□□ -0.68
UBE2AP49459 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
UBE2AP49459 SPDYE13P-201ENST00000445314 798 ntBASIC10.83□□□□□ -0.68
UBE2AP49459 ABR-204ENST00000543210 1049 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2AP49459 NME3-204ENST00000563498 920 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2AP49459 ABR-217ENST00000572441 563 ntTSL 4 BASIC10.83□□□□□ -0.68
UBE2AP49459 AC109462.3-201ENST00000573934 613 ntBASIC10.83□□□□□ -0.68
UBE2AP49459 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC10.83□□□□□ -0.68
UBE2AP49459 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC10.83□□□□□ -0.68
UBE2AP49459 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
UBE2AP49459 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
UBE2AP49459 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
UBE2AP49459 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
UBE2AP49459 AP001094.4-201ENST00000579008 2176 ntBASIC10.83□□□□□ -0.68
UBE2AP49459 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
UBE2AP49459 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2AP49459 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2AP49459 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2AP49459 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2AP49459 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2AP49459 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
UBE2AP49459 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC10.83□□□□□ -0.68
UBE2AP49459 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2AP49459 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2AP49459 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2AP49459 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2AP49459 KRT18P1-202ENST00000452408 1331 ntBASIC10.83□□□□□ -0.68
UBE2AP49459 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
UBE2AP49459 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2AP49459 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2AP49459 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2AP49459 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
UBE2AP49459 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
UBE2AP49459 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 AC010460.3-201ENST00000511359 1579 ntBASIC10.82□□□□□ -0.68
UBE2AP49459 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
UBE2AP49459 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2AP49459 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2AP49459 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 ANKRD26P3-201ENST00000454044 2748 ntBASIC10.82□□□□□ -0.68
UBE2AP49459 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
UBE2AP49459 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
UBE2AP49459 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms