Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 HLA-L-209ENST00000420110 1011 ntBASIC17.11■□□□□ 0.33
MDH1P40925 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.11■□□□□ 0.33
MDH1P40925 IGHV3-52-201ENST00000519770 353 ntBASIC17.11■□□□□ 0.33
MDH1P40925 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
MDH1P40925 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MDH1P40925 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
MDH1P40925 AP005242.2-201ENST00000580065 1175 ntBASIC17.11■□□□□ 0.33
MDH1P40925 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.11■□□□□ 0.33
MDH1P40925 AP002414.2-201ENST00000591780 3365 ntBASIC17.11■□□□□ 0.33
MDH1P40925 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MDH1P40925 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.11■□□□□ 0.33
MDH1P40925 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.11■□□□□ 0.33
MDH1P40925 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
MDH1P40925 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MDH1P40925 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MDH1P40925 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MDH1P40925 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MDH1P40925 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MDH1P40925 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
MDH1P40925 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MDH1P40925 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.1■□□□□ 0.33
MDH1P40925 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.1■□□□□ 0.33
MDH1P40925 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MDH1P40925 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
MDH1P40925 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MDH1P40925 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MDH1P40925 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
MDH1P40925 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MDH1P40925 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MDH1P40925 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
MDH1P40925 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MDH1P40925 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MDH1P40925 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MDH1P40925 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
MDH1P40925 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MDH1P40925 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
MDH1P40925 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MDH1P40925 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.1■□□□□ 0.33
MDH1P40925 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MDH1P40925 AC024563.2-201ENST00000603282 481 ntBASIC17.1■□□□□ 0.33
MDH1P40925 AC019129.2-201ENST00000609837 1235 ntBASIC17.1■□□□□ 0.33
MDH1P40925 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.1■□□□□ 0.33
MDH1P40925 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MDH1P40925 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
MDH1P40925 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MDH1P40925 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
MDH1P40925 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.1■□□□□ 0.33
MDH1P40925 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MDH1P40925 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
MDH1P40925 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MDH1P40925 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MDH1P40925 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
MDH1P40925 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
MDH1P40925 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MDH1P40925 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MDH1P40925 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MDH1P40925 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MDH1P40925 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.09■□□□□ 0.33
MDH1P40925 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MDH1P40925 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.09■□□□□ 0.33
MDH1P40925 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MDH1P40925 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MDH1P40925 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MDH1P40925 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MDH1P40925 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.09■□□□□ 0.33
MDH1P40925 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
MDH1P40925 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.09■□□□□ 0.33
MDH1P40925 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MDH1P40925 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MDH1P40925 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MDH1P40925 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.09■□□□□ 0.33
MDH1P40925 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MDH1P40925 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
MDH1P40925 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.09■□□□□ 0.33
MDH1P40925 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.09■□□□□ 0.33
MDH1P40925 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MDH1P40925 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.09■□□□□ 0.33
MDH1P40925 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.09■□□□□ 0.33
MDH1P40925 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.09■□□□□ 0.33
MDH1P40925 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
MDH1P40925 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MDH1P40925 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
MDH1P40925 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MDH1P40925 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MDH1P40925 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MDH1P40925 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MDH1P40925 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
MDH1P40925 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
MDH1P40925 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MDH1P40925 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.09■□□□□ 0.33
MDH1P40925 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.09■□□□□ 0.33
MDH1P40925 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MDH1P40925 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MDH1P40925 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MDH1P40925 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.09■□□□□ 0.33
MDH1P40925 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MDH1P40925 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
MDH1P40925 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
MDH1P40925 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
MDH1P40925 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms