Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.87□□□□□ -0.03
GDNFP39905 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDNFP39905 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
GDNFP39905 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.87□□□□□ -0.03
GDNFP39905 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.87□□□□□ -0.03
GDNFP39905 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
GDNFP39905 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.87□□□□□ -0.03
GDNFP39905 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDNFP39905 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDNFP39905 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDNFP39905 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GDNFP39905 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
GDNFP39905 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
GDNFP39905 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.86□□□□□ -0.03
GDNFP39905 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
GDNFP39905 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.86□□□□□ -0.03
GDNFP39905 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 KRT18P48-201ENST00000434763 852 ntBASIC14.86□□□□□ -0.03
GDNFP39905 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.86□□□□□ -0.03
GDNFP39905 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.86□□□□□ -0.03
GDNFP39905 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.86□□□□□ -0.03
GDNFP39905 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.86□□□□□ -0.03
GDNFP39905 AC004263.2-201ENST00000617183 678 ntBASIC14.86□□□□□ -0.03
GDNFP39905 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.86□□□□□ -0.03
GDNFP39905 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.86□□□□□ -0.03
GDNFP39905 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
GDNFP39905 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.86□□□□□ -0.03
GDNFP39905 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.86□□□□□ -0.03
GDNFP39905 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.86□□□□□ -0.03
GDNFP39905 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.86□□□□□ -0.03
GDNFP39905 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.86□□□□□ -0.03
GDNFP39905 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
GDNFP39905 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GDNFP39905 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
GDNFP39905 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
GDNFP39905 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.85□□□□□ -0.03
GDNFP39905 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.85□□□□□ -0.03
GDNFP39905 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
GDNFP39905 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 MIR662-201ENST00000384847 95 ntBASIC14.85□□□□□ -0.03
GDNFP39905 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.85□□□□□ -0.03
GDNFP39905 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
GDNFP39905 KRT18P65-201ENST00000439811 1286 ntBASIC14.85□□□□□ -0.03
GDNFP39905 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.85□□□□□ -0.03
GDNFP39905 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 AL671277.2-201ENST00000458060 996 ntBASIC14.85□□□□□ -0.03
GDNFP39905 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.85□□□□□ -0.03
GDNFP39905 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.85□□□□□ -0.03
GDNFP39905 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.85□□□□□ -0.03
GDNFP39905 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.85□□□□□ -0.03
GDNFP39905 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.85□□□□□ -0.03
GDNFP39905 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.85□□□□□ -0.03
GDNFP39905 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
GDNFP39905 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.85□□□□□ -0.03
GDNFP39905 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.85□□□□□ -0.03
GDNFP39905 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.85□□□□□ -0.03
GDNFP39905 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.85□□□□□ -0.03
GDNFP39905 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
GDNFP39905 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
GDNFP39905 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.85□□□□□ -0.03
GDNFP39905 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms