Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTX3P26022 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.33■□□□□ 0.2
PTX3P26022 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTX3P26022 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTX3P26022 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTX3P26022 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTX3P26022 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTX3P26022 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTX3P26022 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTX3P26022 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTX3P26022 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.32■□□□□ 0.2
PTX3P26022 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTX3P26022 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTX3P26022 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTX3P26022 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTX3P26022 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PTX3P26022 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTX3P26022 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTX3P26022 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
PTX3P26022 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.32■□□□□ 0.2
PTX3P26022 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.32■□□□□ 0.2
PTX3P26022 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTX3P26022 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTX3P26022 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.32■□□□□ 0.2
PTX3P26022 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTX3P26022 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.32■□□□□ 0.2
PTX3P26022 MST1L-201ENST00000442552 2185 ntBASIC16.32■□□□□ 0.2
PTX3P26022 AC243591.1-201ENST00000452967 1364 ntBASIC16.32■□□□□ 0.2
PTX3P26022 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PTX3P26022 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.32■□□□□ 0.2
PTX3P26022 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.32■□□□□ 0.2
PTX3P26022 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.32■□□□□ 0.2
PTX3P26022 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PTX3P26022 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.32■□□□□ 0.2
PTX3P26022 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.32■□□□□ 0.2
PTX3P26022 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.32■□□□□ 0.2
PTX3P26022 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.32■□□□□ 0.2
PTX3P26022 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.32■□□□□ 0.2
PTX3P26022 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTX3P26022 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PTX3P26022 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTX3P26022 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTX3P26022 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTX3P26022 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTX3P26022 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.31■□□□□ 0.2
PTX3P26022 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTX3P26022 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTX3P26022 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTX3P26022 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTX3P26022 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
PTX3P26022 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTX3P26022 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.31■□□□□ 0.2
PTX3P26022 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTX3P26022 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTX3P26022 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.31■□□□□ 0.2
PTX3P26022 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.31■□□□□ 0.2
PTX3P26022 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.31■□□□□ 0.2
PTX3P26022 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.31■□□□□ 0.2
PTX3P26022 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.31■□□□□ 0.2
PTX3P26022 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.31■□□□□ 0.2
PTX3P26022 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.31■□□□□ 0.2
PTX3P26022 AC025062.2-201ENST00000605477 670 ntBASIC16.31■□□□□ 0.2
PTX3P26022 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
PTX3P26022 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PTX3P26022 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
PTX3P26022 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.31■□□□□ 0.2
PTX3P26022 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTX3P26022 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTX3P26022 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTX3P26022 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTX3P26022 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PTX3P26022 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTX3P26022 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTX3P26022 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.31■□□□□ 0.2
PTX3P26022 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.31■□□□□ 0.2
PTX3P26022 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.31■□□□□ 0.2
PTX3P26022 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTX3P26022 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTX3P26022 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTX3P26022 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PTX3P26022 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.3■□□□□ 0.2
PTX3P26022 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTX3P26022 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTX3P26022 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTX3P26022 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.3■□□□□ 0.2
PTX3P26022 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTX3P26022 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PTX3P26022 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTX3P26022 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTX3P26022 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTX3P26022 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.3■□□□□ 0.2
PTX3P26022 LAGE3P1-201ENST00000425356 484 ntBASIC16.3■□□□□ 0.2
PTX3P26022 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.3■□□□□ 0.2
PTX3P26022 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.3■□□□□ 0.2
PTX3P26022 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.3■□□□□ 0.2
PTX3P26022 AC073648.2-201ENST00000510116 352 ntBASIC16.3■□□□□ 0.2
PTX3P26022 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTX3P26022 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
PTX3P26022 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.3■□□□□ 0.2
PTX3P26022 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms