Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PPP3CBP16298 AL049757.1-201ENST00000616842 1596 ntBASIC15.32■□□□□ 0.04
PPP3CBP16298 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.32■□□□□ 0.04
PPP3CBP16298 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP3CBP16298 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.32■□□□□ 0.04
PPP3CBP16298 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.32■□□□□ 0.04
PPP3CBP16298 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP3CBP16298 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.32■□□□□ 0.04
PPP3CBP16298 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PPP3CBP16298 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP3CBP16298 KRT18P13-201ENST00000400056 1290 ntBASIC15.32■□□□□ 0.04
PPP3CBP16298 AC002558.1-201ENST00000488906 803 ntBASIC15.32■□□□□ 0.04
PPP3CBP16298 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.32■□□□□ 0.04
PPP3CBP16298 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.32■□□□□ 0.04
PPP3CBP16298 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PPP3CBP16298 AC006538.3-201ENST00000612495 578 ntBASIC15.32■□□□□ 0.04
PPP3CBP16298 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP3CBP16298 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PPP3CBP16298 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP3CBP16298 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP3CBP16298 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PPP3CBP16298 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP3CBP16298 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PPP3CBP16298 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.32■□□□□ 0.04
PPP3CBP16298 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PPP3CBP16298 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PPP3CBP16298 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP3CBP16298 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP3CBP16298 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PPP3CBP16298 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.32■□□□□ 0.04
PPP3CBP16298 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PPP3CBP16298 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.32■□□□□ 0.04
PPP3CBP16298 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.32■□□□□ 0.04
PPP3CBP16298 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP3CBP16298 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP3CBP16298 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.32■□□□□ 0.04
PPP3CBP16298 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PPP3CBP16298 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PPP3CBP16298 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PPP3CBP16298 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.31■□□□□ 0.04
PPP3CBP16298 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PPP3CBP16298 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.31■□□□□ 0.04
PPP3CBP16298 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PPP3CBP16298 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PPP3CBP16298 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PPP3CBP16298 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PPP3CBP16298 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PPP3CBP16298 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PPP3CBP16298 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.31■□□□□ 0.04
PPP3CBP16298 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PPP3CBP16298 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PPP3CBP16298 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PPP3CBP16298 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PPP3CBP16298 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.31■□□□□ 0.04
PPP3CBP16298 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PPP3CBP16298 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.31■□□□□ 0.04
PPP3CBP16298 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.31■□□□□ 0.04
PPP3CBP16298 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.31■□□□□ 0.04
PPP3CBP16298 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PPP3CBP16298 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PPP3CBP16298 AC136632.2-201ENST00000512891 861 ntBASIC15.31■□□□□ 0.04
PPP3CBP16298 RNA5SP415-201ENST00000517246 115 ntBASIC15.31■□□□□ 0.04
PPP3CBP16298 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PPP3CBP16298 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PPP3CBP16298 AC012640.2-201ENST00000561606 901 ntBASIC15.31■□□□□ 0.04
PPP3CBP16298 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.31■□□□□ 0.04
PPP3CBP16298 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.31■□□□□ 0.04
PPP3CBP16298 AL356488.2-201ENST00000602755 427 ntBASIC15.31■□□□□ 0.04
PPP3CBP16298 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PPP3CBP16298 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PPP3CBP16298 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PPP3CBP16298 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.31■□□□□ 0.04
PPP3CBP16298 NCF1C-201ENST00000438382 1427 ntBASIC15.31■□□□□ 0.04
PPP3CBP16298 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
PPP3CBP16298 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.31■□□□□ 0.04
PPP3CBP16298 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.31■□□□□ 0.04
PPP3CBP16298 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PPP3CBP16298 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PPP3CBP16298 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
PPP3CBP16298 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.31■□□□□ 0.04
PPP3CBP16298 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PPP3CBP16298 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PPP3CBP16298 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PPP3CBP16298 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
PPP3CBP16298 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PPP3CBP16298 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PPP3CBP16298 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PPP3CBP16298 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PPP3CBP16298 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.3■□□□□ 0.04
PPP3CBP16298 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PPP3CBP16298 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PPP3CBP16298 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PPP3CBP16298 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PPP3CBP16298 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PPP3CBP16298 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PPP3CBP16298 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.3■□□□□ 0.04
PPP3CBP16298 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.3■□□□□ 0.04
PPP3CBP16298 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PPP3CBP16298 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.3■□□□□ 0.04
PPP3CBP16298 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms