Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LTAP01374 AC009336.1-201ENST00000608941 1553 ntBASIC12.84□□□□□ -0.35
LTAP01374 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.84□□□□□ -0.35
LTAP01374 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
LTAP01374 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LTAP01374 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LTAP01374 AC005052.1-201ENST00000625181 2492 ntBASIC12.84□□□□□ -0.35
LTAP01374 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
LTAP01374 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.84□□□□□ -0.35
LTAP01374 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LTAP01374 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LTAP01374 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.84□□□□□ -0.35
LTAP01374 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LTAP01374 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LTAP01374 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LTAP01374 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LTAP01374 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LTAP01374 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.83□□□□□ -0.35
LTAP01374 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
LTAP01374 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
LTAP01374 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LTAP01374 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
LTAP01374 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LTAP01374 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC12.83□□□□□ -0.35
LTAP01374 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
LTAP01374 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC12.83□□□□□ -0.35
LTAP01374 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LTAP01374 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LTAP01374 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LTAP01374 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
LTAP01374 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LTAP01374 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LTAP01374 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LTAP01374 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
LTAP01374 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LTAP01374 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LTAP01374 KRT8P10-201ENST00000450021 1447 ntBASIC12.83□□□□□ -0.36
LTAP01374 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
LTAP01374 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LTAP01374 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LTAP01374 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LTAP01374 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LTAP01374 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
LTAP01374 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LTAP01374 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LTAP01374 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC12.83□□□□□ -0.36
LTAP01374 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.83□□□□□ -0.36
LTAP01374 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC12.83□□□□□ -0.36
LTAP01374 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.83□□□□□ -0.36
LTAP01374 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LTAP01374 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC12.83□□□□□ -0.36
LTAP01374 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LTAP01374 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.83□□□□□ -0.36
LTAP01374 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LTAP01374 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LTAP01374 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.83□□□□□ -0.36
LTAP01374 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.83□□□□□ -0.36
LTAP01374 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LTAP01374 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.83□□□□□ -0.36
LTAP01374 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.83□□□□□ -0.36
LTAP01374 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.83□□□□□ -0.36
LTAP01374 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LTAP01374 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.83□□□□□ -0.36
LTAP01374 LINC00895-201ENST00000629028 1637 ntBASIC12.83□□□□□ -0.36
LTAP01374 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LTAP01374 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LTAP01374 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LTAP01374 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.83□□□□□ -0.36
LTAP01374 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LTAP01374 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
LTAP01374 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LTAP01374 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
LTAP01374 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LTAP01374 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
LTAP01374 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
LTAP01374 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LTAP01374 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LTAP01374 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LTAP01374 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LTAP01374 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LTAP01374 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LTAP01374 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.82□□□□□ -0.36
LTAP01374 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.82□□□□□ -0.36
LTAP01374 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LTAP01374 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LTAP01374 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.82□□□□□ -0.36
LTAP01374 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.82□□□□□ -0.36
LTAP01374 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LTAP01374 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.82□□□□□ -0.36
LTAP01374 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.82□□□□□ -0.36
LTAP01374 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.82□□□□□ -0.36
LTAP01374 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.82□□□□□ -0.36
LTAP01374 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
LTAP01374 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LTAP01374 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LTAP01374 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LTAP01374 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
LTAP01374 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LTAP01374 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LTAP01374 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms