Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP1P01033 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TIMP1P01033 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP1P01033 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP1P01033 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.16■□□□□ 0.5
TIMP1P01033 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP1P01033 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP1P01033 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP1P01033 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TIMP1P01033 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.16■□□□□ 0.5
TIMP1P01033 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP1P01033 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP1P01033 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.16■□□□□ 0.5
TIMP1P01033 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.16■□□□□ 0.5
TIMP1P01033 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TIMP1P01033 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.16■□□□□ 0.5
TIMP1P01033 AC098859.1-201ENST00000502915 1238 ntBASIC18.16■□□□□ 0.5
TIMP1P01033 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.16■□□□□ 0.5
TIMP1P01033 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.16■□□□□ 0.5
TIMP1P01033 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
TIMP1P01033 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP1P01033 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.16■□□□□ 0.5
TIMP1P01033 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP1P01033 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TIMP1P01033 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.16■□□□□ 0.5
TIMP1P01033 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP1P01033 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.16■□□□□ 0.5
TIMP1P01033 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TIMP1P01033 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP1P01033 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.15■□□□□ 0.5
TIMP1P01033 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TIMP1P01033 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.15■□□□□ 0.5
TIMP1P01033 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP1P01033 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP1P01033 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP1P01033 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP1P01033 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.15■□□□□ 0.5
TIMP1P01033 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.15■□□□□ 0.5
TIMP1P01033 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
TIMP1P01033 AL138781.2-201ENST00000617896 1843 ntBASIC18.15■□□□□ 0.5
TIMP1P01033 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.15■□□□□ 0.5
TIMP1P01033 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP1P01033 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP1P01033 AC092658.1-201ENST00000505836 891 ntBASIC18.15■□□□□ 0.5
TIMP1P01033 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.15■□□□□ 0.5
TIMP1P01033 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.15■□□□□ 0.5
TIMP1P01033 AC004790.1-201ENST00000612686 536 ntBASIC18.15■□□□□ 0.5
TIMP1P01033 AC007431.3-201ENST00000623221 587 ntBASIC18.15■□□□□ 0.5
TIMP1P01033 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP1P01033 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP1P01033 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TIMP1P01033 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP1P01033 AC073439.1-201ENST00000624121 1774 ntBASIC18.14■□□□□ 0.5
TIMP1P01033 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
TIMP1P01033 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
TIMP1P01033 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TIMP1P01033 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
TIMP1P01033 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TIMP1P01033 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TIMP1P01033 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TIMP1P01033 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TIMP1P01033 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TIMP1P01033 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TIMP1P01033 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.14■□□□□ 0.49
TIMP1P01033 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TIMP1P01033 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
TIMP1P01033 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.14■□□□□ 0.49
TIMP1P01033 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.14■□□□□ 0.49
TIMP1P01033 RN7SL618P-201ENST00000477850 296 ntBASIC18.14■□□□□ 0.49
TIMP1P01033 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.14■□□□□ 0.49
TIMP1P01033 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
TIMP1P01033 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TIMP1P01033 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.14■□□□□ 0.49
TIMP1P01033 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.14■□□□□ 0.49
TIMP1P01033 SLC7A15P-201ENST00000424028 1363 ntBASIC18.14■□□□□ 0.49
TIMP1P01033 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TIMP1P01033 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TIMP1P01033 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
TIMP1P01033 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TIMP1P01033 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.14■□□□□ 0.49
TIMP1P01033 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.14■□□□□ 0.49
TIMP1P01033 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TIMP1P01033 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.14■□□□□ 0.49
TIMP1P01033 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.14■□□□□ 0.49
TIMP1P01033 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.14■□□□□ 0.49
TIMP1P01033 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TIMP1P01033 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TIMP1P01033 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TIMP1P01033 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TIMP1P01033 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.13■□□□□ 0.49
TIMP1P01033 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
TIMP1P01033 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TIMP1P01033 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.13■□□□□ 0.49
TIMP1P01033 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TIMP1P01033 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TIMP1P01033 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TIMP1P01033 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
TIMP1P01033 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TIMP1P01033 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TIMP1P01033 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms