Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.29□□□□□ -0.12
SIX6O95475 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SIX6O95475 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.29□□□□□ -0.12
SIX6O95475 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SIX6O95475 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SIX6O95475 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
SIX6O95475 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIX6O95475 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIX6O95475 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIX6O95475 CICP4-201ENST00000447359 2812 ntBASIC14.28□□□□□ -0.12
SIX6O95475 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIX6O95475 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIX6O95475 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.28□□□□□ -0.12
SIX6O95475 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIX6O95475 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIX6O95475 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIX6O95475 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIX6O95475 AL645728.1-201ENST00000366221 2101 ntBASIC14.28□□□□□ -0.12
SIX6O95475 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SIX6O95475 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
SIX6O95475 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SIX6O95475 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SIX6O95475 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SIX6O95475 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.28□□□□□ -0.12
SIX6O95475 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.28□□□□□ -0.12
SIX6O95475 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.28□□□□□ -0.12
SIX6O95475 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIX6O95475 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
SIX6O95475 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SIX6O95475 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIX6O95475 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIX6O95475 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SIX6O95475 CA15P1-201ENST00000481698 905 ntBASIC14.28□□□□□ -0.12
SIX6O95475 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.28□□□□□ -0.12
SIX6O95475 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIX6O95475 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.28□□□□□ -0.12
SIX6O95475 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.28□□□□□ -0.12
SIX6O95475 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SIX6O95475 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIX6O95475 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.28□□□□□ -0.12
SIX6O95475 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIX6O95475 AC006538.1-201ENST00000567905 1585 ntBASIC14.28□□□□□ -0.12
SIX6O95475 FSCN1P1-201ENST00000568912 1481 ntBASIC14.28□□□□□ -0.12
SIX6O95475 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.28□□□□□ -0.12
SIX6O95475 AC008687.5-201ENST00000593746 558 ntBASIC14.28□□□□□ -0.12
SIX6O95475 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.28□□□□□ -0.12
SIX6O95475 AC067930.6-201ENST00000623257 4947 ntBASIC14.28□□□□□ -0.12
SIX6O95475 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
SIX6O95475 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIX6O95475 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIX6O95475 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIX6O95475 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
SIX6O95475 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SIX6O95475 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIX6O95475 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SIX6O95475 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SIX6O95475 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIX6O95475 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SIX6O95475 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SIX6O95475 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SIX6O95475 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SIX6O95475 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SIX6O95475 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.27□□□□□ -0.12
SIX6O95475 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SIX6O95475 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SIX6O95475 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SIX6O95475 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SIX6O95475 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SIX6O95475 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SIX6O95475 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.27□□□□□ -0.12
SIX6O95475 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SIX6O95475 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SIX6O95475 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.27□□□□□ -0.13
SIX6O95475 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.27□□□□□ -0.13
SIX6O95475 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SIX6O95475 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SIX6O95475 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.27□□□□□ -0.13
SIX6O95475 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.27□□□□□ -0.13
SIX6O95475 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.27□□□□□ -0.13
SIX6O95475 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.27□□□□□ -0.13
SIX6O95475 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SIX6O95475 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SIX6O95475 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.27□□□□□ -0.13
SIX6O95475 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SIX6O95475 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SIX6O95475 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SIX6O95475 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.27□□□□□ -0.13
SIX6O95475 SNX18-202ENST00000343017 3140 ntBASIC14.27□□□□□ -0.13
SIX6O95475 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.27□□□□□ -0.13
SIX6O95475 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SIX6O95475 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
SIX6O95475 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SIX6O95475 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIX6O95475 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIX6O95475 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.26□□□□□ -0.13
SIX6O95475 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SIX6O95475 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.26□□□□□ -0.13
SIX6O95475 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SIX6O95475 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIX6O95475 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms