Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT1O95170 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT1O95170 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CDRT1O95170 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT1O95170 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CDRT1O95170 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT1O95170 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT1O95170 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT1O95170 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT1O95170 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.22■□□□□ 0.03
CDRT1O95170 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.22■□□□□ 0.03
CDRT1O95170 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.22■□□□□ 0.03
CDRT1O95170 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.22■□□□□ 0.03
CDRT1O95170 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT1O95170 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.22■□□□□ 0.03
CDRT1O95170 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.22■□□□□ 0.03
CDRT1O95170 GCSHP2-201ENST00000560971 527 ntBASIC15.22■□□□□ 0.03
CDRT1O95170 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.22■□□□□ 0.03
CDRT1O95170 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.22■□□□□ 0.03
CDRT1O95170 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.22■□□□□ 0.03
CDRT1O95170 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT1O95170 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.22■□□□□ 0.03
CDRT1O95170 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.22■□□□□ 0.03
CDRT1O95170 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT1O95170 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT1O95170 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT1O95170 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT1O95170 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT1O95170 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.22■□□□□ 0.03
CDRT1O95170 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT1O95170 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT1O95170 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.22■□□□□ 0.03
CDRT1O95170 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT1O95170 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CDRT1O95170 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDRT1O95170 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.21■□□□□ 0.03
CDRT1O95170 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDRT1O95170 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.21■□□□□ 0.03
CDRT1O95170 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDRT1O95170 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDRT1O95170 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDRT1O95170 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDRT1O95170 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDRT1O95170 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDRT1O95170 AL136379.1-201ENST00000623471 2642 ntBASIC15.21■□□□□ 0.03
CDRT1O95170 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CDRT1O95170 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDRT1O95170 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDRT1O95170 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDRT1O95170 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDRT1O95170 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.21■□□□□ 0.03
CDRT1O95170 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.21■□□□□ 0.03
CDRT1O95170 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDRT1O95170 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDRT1O95170 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDRT1O95170 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.21■□□□□ 0.03
CDRT1O95170 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDRT1O95170 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDRT1O95170 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDRT1O95170 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.21■□□□□ 0.03
CDRT1O95170 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDRT1O95170 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDRT1O95170 AC141257.4-201ENST00000634557 245 ntBASIC15.21■□□□□ 0.03
CDRT1O95170 AC136944.6-201ENST00000634818 245 ntBASIC15.21■□□□□ 0.03
CDRT1O95170 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDRT1O95170 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.21■□□□□ 0.03
CDRT1O95170 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDRT1O95170 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDRT1O95170 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDRT1O95170 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.21■□□□□ 0.03
CDRT1O95170 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDRT1O95170 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDRT1O95170 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.21■□□□□ 0.02
CDRT1O95170 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDRT1O95170 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDRT1O95170 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDRT1O95170 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CDRT1O95170 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.2■□□□□ 0.02
CDRT1O95170 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDRT1O95170 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CDRT1O95170 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CDRT1O95170 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDRT1O95170 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDRT1O95170 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.2■□□□□ 0.02
CDRT1O95170 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDRT1O95170 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CDRT1O95170 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.2■□□□□ 0.02
CDRT1O95170 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.2■□□□□ 0.02
CDRT1O95170 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.2■□□□□ 0.02
CDRT1O95170 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.2■□□□□ 0.02
CDRT1O95170 AC002558.1-201ENST00000488906 803 ntBASIC15.2■□□□□ 0.02
CDRT1O95170 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.2■□□□□ 0.02
CDRT1O95170 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.2■□□□□ 0.02
CDRT1O95170 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.2■□□□□ 0.02
CDRT1O95170 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.2■□□□□ 0.02
CDRT1O95170 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.2■□□□□ 0.02
CDRT1O95170 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.2■□□□□ 0.02
CDRT1O95170 AC024563.2-201ENST00000603282 481 ntBASIC15.2■□□□□ 0.02
CDRT1O95170 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDRT1O95170 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms