Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 AC126755.1-201ENST00000525846 6405 ntBASIC15.7■□□□□ 0.1
IDH3BO43837 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
IDH3BO43837 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.7■□□□□ 0.1
IDH3BO43837 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.7■□□□□ 0.1
IDH3BO43837 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
IDH3BO43837 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.7■□□□□ 0.1
IDH3BO43837 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
IDH3BO43837 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IDH3BO43837 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IDH3BO43837 AC007326.2-201ENST00000624224 7579 ntBASIC15.7■□□□□ 0.1
IDH3BO43837 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IDH3BO43837 AC007950.2-201ENST00000615045 2347 ntBASIC15.69■□□□□ 0.1
IDH3BO43837 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
IDH3BO43837 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IDH3BO43837 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IDH3BO43837 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
IDH3BO43837 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IDH3BO43837 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IDH3BO43837 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
IDH3BO43837 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
IDH3BO43837 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IDH3BO43837 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
IDH3BO43837 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
IDH3BO43837 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.69■□□□□ 0.1
IDH3BO43837 AC103564.2-201ENST00000432853 1299 ntBASIC15.69■□□□□ 0.1
IDH3BO43837 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.69■□□□□ 0.1
IDH3BO43837 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.69■□□□□ 0.1
IDH3BO43837 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.69■□□□□ 0.1
IDH3BO43837 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.69■□□□□ 0.1
IDH3BO43837 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.69■□□□□ 0.1
IDH3BO43837 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.69■□□□□ 0.1
IDH3BO43837 LINC02228-204ENST00000642115 2962 ntBASIC15.69■□□□□ 0.1
IDH3BO43837 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IDH3BO43837 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IDH3BO43837 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.69■□□□□ 0.1
IDH3BO43837 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
IDH3BO43837 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IDH3BO43837 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IDH3BO43837 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
IDH3BO43837 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.69■□□□□ 0.1
IDH3BO43837 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IDH3BO43837 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IDH3BO43837 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
IDH3BO43837 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
IDH3BO43837 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
IDH3BO43837 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
IDH3BO43837 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
IDH3BO43837 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 AC093525.9-201ENST00000624961 1746 ntBASIC15.68■□□□□ 0.1
IDH3BO43837 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 AL365209.1-201ENST00000624418 6473 ntBASIC15.68■□□□□ 0.1
IDH3BO43837 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
IDH3BO43837 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.68■□□□□ 0.1
IDH3BO43837 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
IDH3BO43837 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.68■□□□□ 0.1
IDH3BO43837 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.68■□□□□ 0.1
IDH3BO43837 AC007967.3-201ENST00000434308 558 ntBASIC15.68■□□□□ 0.1
IDH3BO43837 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.68■□□□□ 0.1
IDH3BO43837 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
IDH3BO43837 AL353801.3-201ENST00000609898 542 ntBASIC15.68■□□□□ 0.1
IDH3BO43837 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
IDH3BO43837 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
IDH3BO43837 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.68■□□□□ 0.1
IDH3BO43837 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
IDH3BO43837 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IDH3BO43837 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
IDH3BO43837 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
IDH3BO43837 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
IDH3BO43837 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
IDH3BO43837 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
IDH3BO43837 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
IDH3BO43837 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
IDH3BO43837 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
IDH3BO43837 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
IDH3BO43837 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
IDH3BO43837 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.67■□□□□ 0.1
IDH3BO43837 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
IDH3BO43837 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms