Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPB4C9JG80 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.02■□□□□ -0
NPIPB4C9JG80 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPIPB4C9JG80 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPB4C9JG80 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPB4C9JG80 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.02■□□□□ -0
NPIPB4C9JG80 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPB4C9JG80 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
NPIPB4C9JG80 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPB4C9JG80 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPIPB4C9JG80 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.02■□□□□ -0
NPIPB4C9JG80 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPB4C9JG80 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPB4C9JG80 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPB4C9JG80 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.02■□□□□ -0
NPIPB4C9JG80 HCG4-201ENST00000418983 998 ntBASIC15.02■□□□□ -0
NPIPB4C9JG80 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.02■□□□□ -0
NPIPB4C9JG80 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.02■□□□□ -0
NPIPB4C9JG80 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.02■□□□□ -0
NPIPB4C9JG80 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.02■□□□□ -0
NPIPB4C9JG80 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.02■□□□□ -0
NPIPB4C9JG80 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.02■□□□□ -0
NPIPB4C9JG80 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.02□□□□□ -0.01
NPIPB4C9JG80 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPB4C9JG80 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPB4C9JG80 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPB4C9JG80 AC131009.4-201ENST00000624048 1740 ntBASIC15.02□□□□□ -0.01
NPIPB4C9JG80 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPB4C9JG80 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPB4C9JG80 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.02□□□□□ -0.01
NPIPB4C9JG80 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPB4C9JG80 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.02□□□□□ -0.01
NPIPB4C9JG80 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.02□□□□□ -0.01
NPIPB4C9JG80 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPB4C9JG80 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.02□□□□□ -0.01
NPIPB4C9JG80 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 SNX33P1-201ENST00000592116 1762 ntBASIC15.01□□□□□ -0.01
NPIPB4C9JG80 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 FAM197Y8-203ENST00000450145 560 ntBASIC15.01□□□□□ -0.01
NPIPB4C9JG80 EMBP1-201ENST00000458200 901 ntBASIC15.01□□□□□ -0.01
NPIPB4C9JG80 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 AL356488.2-201ENST00000602755 427 ntBASIC15.01□□□□□ -0.01
NPIPB4C9JG80 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB4C9JG80 KRT8P39-201ENST00000396270 1433 ntBASIC15□□□□□ -0.01
NPIPB4C9JG80 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
NPIPB4C9JG80 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15□□□□□ -0.01
NPIPB4C9JG80 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
NPIPB4C9JG80 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
NPIPB4C9JG80 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
NPIPB4C9JG80 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
NPIPB4C9JG80 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPB4C9JG80 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPB4C9JG80 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPB4C9JG80 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPB4C9JG80 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPB4C9JG80 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPB4C9JG80 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15□□□□□ -0.01
NPIPB4C9JG80 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
NPIPB4C9JG80 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPB4C9JG80 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPB4C9JG80 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NPIPB4C9JG80 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPB4C9JG80 AC004870.1-201ENST00000315132 882 ntBASIC15□□□□□ -0.01
NPIPB4C9JG80 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPB4C9JG80 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPB4C9JG80 MED22-202ENST00000371999 987 ntTSL 3 BASIC15□□□□□ -0.01
NPIPB4C9JG80 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPB4C9JG80 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPB4C9JG80 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms