Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 SPDYE21P-201ENST00000413323 827 ntBASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 AC132008.2-207ENST00000454517 770 ntBASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 AL732292.2-201ENST00000609649 430 ntBASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 AP000867.4-201ENST00000641616 219 ntBASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 AC097637.2-201ENST00000624096 1997 ntBASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 AC148477.5-201ENST00000625164 1645 ntBASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 NUS1P1-201ENST00000446295 882 ntBASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 AC092053.1-201ENST00000605787 1936 ntBASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV1A0A0A0MS02 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms