Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 AC080080.1-201ENST00000625121 2420 ntBASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 Z83851.2-201ENST00000609564 659 ntBASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAI2Q9Y5P3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RAI2Q9Y5P3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.21■□□□□ 0.34
RAI2Q9Y5P3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
RAI2Q9Y5P3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RAI2Q9Y5P3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 MRPL20P1-201ENST00000400819 433 ntBASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 HLA-J-203ENST00000494367 1087 ntBASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RAI2Q9Y5P3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAI2Q9Y5P3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.19■□□□□ 0.34
RAI2Q9Y5P3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAI2Q9Y5P3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAI2Q9Y5P3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAI2Q9Y5P3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAI2Q9Y5P3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RAI2Q9Y5P3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAI2Q9Y5P3 AC002310.6-201ENST00000624451 1377 ntBASIC17.19■□□□□ 0.34
RAI2Q9Y5P3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAI2Q9Y5P3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAI2Q9Y5P3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.19■□□□□ 0.34
RAI2Q9Y5P3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.19■□□□□ 0.34
RAI2Q9Y5P3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.19■□□□□ 0.34
RAI2Q9Y5P3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAI2Q9Y5P3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.19■□□□□ 0.34
RAI2Q9Y5P3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.19■□□□□ 0.34
RAI2Q9Y5P3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.19■□□□□ 0.34
RAI2Q9Y5P3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms