Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 AC138969.2-201ENST00000532739 9932 ntBASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 AC092666.2-201ENST00000613287 246 ntBASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 COX5BP2-201ENST00000392354 334 ntBASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 KRT18P48-201ENST00000434763 852 ntBASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 FAM201B-201ENST00000458407 597 ntBASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 CD99P1-205ENST00000527459 561 ntBASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 AC142381.4-202ENST00000563973 229 ntBASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.29□□□□□ -0.12
KCNIP3Q9Y2W7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms