Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 PRYP5-201ENST00000451909 266 ntBASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 AP001269.4-201ENST00000609611 512 ntBASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 REXO1L6P-202ENST00000619970 1078 ntBASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAPPC4Q9Y296 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 AL355877.3-201ENST00000622820 899 ntBASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 AC012313.10-201ENST00000623509 926 ntBASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 AC005052.1-201ENST00000625181 2492 ntBASIC15.65■□□□□ 0.1
TRAPPC4Q9Y296 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 AC105917.1-201ENST00000506637 2539 ntBASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 DUSP5P1-201ENST00000441325 1139 ntBASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 SAPCD2P3-201ENST00000455031 850 ntBASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 MTDHP3-201ENST00000594186 672 ntBASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAPPC4Q9Y296 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms