Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 AL391256.1-201ENST00000443260 1855 ntBASIC16.29■□□□□ 0.2
BRF2Q9HAW0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 PAWRP1-201ENST00000451083 565 ntBASIC16.28■□□□□ 0.2
BRF2Q9HAW0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 AF228730.7-201ENST00000641842 219 ntBASIC16.28■□□□□ 0.2
BRF2Q9HAW0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
BRF2Q9HAW0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 AKR1C7P-201ENST00000305623 895 ntBASIC16.27■□□□□ 0.2
BRF2Q9HAW0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 AC013467.2-201ENST00000605472 835 ntBASIC16.27■□□□□ 0.2
BRF2Q9HAW0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.27■□□□□ 0.2
BRF2Q9HAW0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.27■□□□□ 0.19
BRF2Q9HAW0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BRF2Q9HAW0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BRF2Q9HAW0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.19
BRF2Q9HAW0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
BRF2Q9HAW0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BRF2Q9HAW0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.27■□□□□ 0.19
BRF2Q9HAW0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BRF2Q9HAW0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 OR6D1P-203ENST00000641209 4860 ntBASIC16.26■□□□□ 0.19
BRF2Q9HAW0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms