Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 FOSL1P1-201ENST00000511041 816 ntBASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 AC124947.2-201ENST00000547118 1133 ntBASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 MST1L-201ENST00000442552 2185 ntBASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC68Q9H2F9 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 AC018695.7-201ENST00000624587 2492 ntBASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 GPR89P-201ENST00000407924 1495 ntBASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC68Q9H2F9 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 AC092053.1-201ENST00000605787 1936 ntBASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 ACTG1P4-201ENST00000425123 1122 ntBASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 NUS1P1-201ENST00000446295 882 ntBASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 AL121772.3-201ENST00000610840 674 ntBASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 SIGLEC16-201ENST00000599858 1437 ntBASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms