Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM2Q9C040 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM2Q9C040 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM2Q9C040 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRIM2Q9C040 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRIM2Q9C040 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 AC079776.2-201ENST00000641154 1609 ntBASIC15.7■□□□□ 0.1
TRIM2Q9C040 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.7■□□□□ 0.1
TRIM2Q9C040 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
TRIM2Q9C040 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.7■□□□□ 0.1
TRIM2Q9C040 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.7■□□□□ 0.1
TRIM2Q9C040 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.7■□□□□ 0.1
TRIM2Q9C040 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM2Q9C040 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM2Q9C040 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRIM2Q9C040 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM2Q9C040 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
TRIM2Q9C040 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM2Q9C040 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRIM2Q9C040 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 AGGF1P2-201ENST00000426656 2106 ntBASIC15.7■□□□□ 0.1
TRIM2Q9C040 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.69■□□□□ 0.1
TRIM2Q9C040 AC097637.2-201ENST00000624096 1997 ntBASIC15.69■□□□□ 0.1
TRIM2Q9C040 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM2Q9C040 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
TRIM2Q9C040 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM2Q9C040 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM2Q9C040 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM2Q9C040 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM2Q9C040 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM2Q9C040 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM2Q9C040 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM2Q9C040 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRIM2Q9C040 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM2Q9C040 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM2Q9C040 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM2Q9C040 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM2Q9C040 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM2Q9C040 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.69■□□□□ 0.1
TRIM2Q9C040 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM2Q9C040 AP002490.2-201ENST00000524791 560 ntBASIC15.69■□□□□ 0.1
TRIM2Q9C040 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.69■□□□□ 0.1
TRIM2Q9C040 LINC01711-201ENST00000598340 967 ntBASIC15.69■□□□□ 0.1
TRIM2Q9C040 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM2Q9C040 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM2Q9C040 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM2Q9C040 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM2Q9C040 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM2Q9C040 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRIM2Q9C040 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRIM2Q9C040 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM2Q9C040 TUBB8P12-201ENST00000308911 1335 ntBASIC15.68■□□□□ 0.1
TRIM2Q9C040 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM2Q9C040 TUBB7P-202ENST00000428444 1305 ntBASIC15.68■□□□□ 0.1
TRIM2Q9C040 TUBB8P7-204ENST00000567960 1332 ntBASIC15.68■□□□□ 0.1
TRIM2Q9C040 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM2Q9C040 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM2Q9C040 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
TRIM2Q9C040 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRIM2Q9C040 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM2Q9C040 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM2Q9C040 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM2Q9C040 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM2Q9C040 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM2Q9C040 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM2Q9C040 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM2Q9C040 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM2Q9C040 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM2Q9C040 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM2Q9C040 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM2Q9C040 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRIM2Q9C040 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM2Q9C040 AC138894.3-201ENST00000603787 634 ntBASIC15.68■□□□□ 0.1
TRIM2Q9C040 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRIM2Q9C040 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRIM2Q9C040 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM2Q9C040 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM2Q9C040 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM2Q9C040 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
TRIM2Q9C040 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM2Q9C040 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms