Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RNF2Q99496 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.63□□□□□ -0.23
RNF2Q99496 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF2Q99496 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RNF2Q99496 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RNF2Q99496 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
RNF2Q99496 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF2Q99496 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF2Q99496 AC005915.1-201ENST00000624912 2018 ntBASIC13.63□□□□□ -0.23
RNF2Q99496 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.62□□□□□ -0.23
RNF2Q99496 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RNF2Q99496 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RNF2Q99496 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RNF2Q99496 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.62□□□□□ -0.23
RNF2Q99496 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 MYCLP1-201ENST00000372451 1075 ntBASIC13.62□□□□□ -0.23
RNF2Q99496 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 TSPY22P-201ENST00000427496 604 ntBASIC13.62□□□□□ -0.23
RNF2Q99496 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF2Q99496 AC124947.2-201ENST00000547118 1133 ntBASIC13.62□□□□□ -0.23
RNF2Q99496 AC011498.5-201ENST00000592027 486 ntBASIC13.62□□□□□ -0.23
RNF2Q99496 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.62□□□□□ -0.23
RNF2Q99496 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.62□□□□□ -0.23
RNF2Q99496 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RNF2Q99496 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 AC005332.1-201ENST00000577698 1310 ntBASIC13.62□□□□□ -0.23
RNF2Q99496 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RNF2Q99496 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RNF2Q99496 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF2Q99496 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RNF2Q99496 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF2Q99496 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 AC093525.9-201ENST00000624961 1746 ntBASIC13.61□□□□□ -0.23
RNF2Q99496 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
RNF2Q99496 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.61□□□□□ -0.23
RNF2Q99496 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
RNF2Q99496 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF2Q99496 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
RNF2Q99496 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF2Q99496 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
RNF2Q99496 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF2Q99496 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
RNF2Q99496 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
RNF2Q99496 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.61□□□□□ -0.23
RNF2Q99496 MIR1224-201ENST00000408193 85 ntBASIC13.61□□□□□ -0.23
RNF2Q99496 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 KRT18P35-201ENST00000510488 1269 ntBASIC13.61□□□□□ -0.23
RNF2Q99496 FAM86EP-206ENST00000510506 987 ntBASIC13.61□□□□□ -0.23
RNF2Q99496 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.61□□□□□ -0.23
RNF2Q99496 AC010331.1-201ENST00000611423 582 ntBASIC13.61□□□□□ -0.23
RNF2Q99496 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.61□□□□□ -0.23
RNF2Q99496 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RNF2Q99496 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF2Q99496 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
RNF2Q99496 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF2Q99496 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF2Q99496 AC005052.1-201ENST00000625181 2492 ntBASIC13.61□□□□□ -0.23
RNF2Q99496 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF2Q99496 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF2Q99496 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms