Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC85AQ96PX6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC85AQ96PX6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC85AQ96PX6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC85AQ96PX6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC85AQ96PX6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
CCDC85AQ96PX6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC85AQ96PX6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC85AQ96PX6 FAM58DP-201ENST00000428076 619 ntBASIC21.05■□□□□ 0.96
CCDC85AQ96PX6 AL592309.1-201ENST00000443127 649 ntBASIC21.05■□□□□ 0.96
CCDC85AQ96PX6 HLA-J-203ENST00000494367 1087 ntBASIC21.05■□□□□ 0.96
CCDC85AQ96PX6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC85AQ96PX6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC85AQ96PX6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.05■□□□□ 0.96
CCDC85AQ96PX6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC85AQ96PX6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC85AQ96PX6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CCDC85AQ96PX6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CCDC85AQ96PX6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC85AQ96PX6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC85AQ96PX6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC85AQ96PX6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 NOC2LP2-201ENST00000407594 1944 ntBASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC85AQ96PX6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 AC116353.5-201ENST00000638148 1699 ntBASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 MIR770-201ENST00000390219 98 ntBASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 HNRNPFP1-201ENST00000391730 1133 ntBASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 FRMD8P1-201ENST00000440433 1524 ntBASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC85AQ96PX6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 AL138688.1-201ENST00000624851 1594 ntBASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC85AQ96PX6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms