Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 AC138649.4-201ENST00000612222 287 ntBASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 AC092919.2-201ENST00000623631 1645 ntBASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 AL133373.2-201ENST00000623187 2828 ntBASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 AC002472.2-201ENST00000442739 958 ntBASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 TSPY16P-201ENST00000449843 468 ntBASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 SPDYE11-202ENST00000450699 704 ntBASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 SPDYE9P-201ENST00000570642 692 ntBASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 SPDYE10P-202ENST00000612005 668 ntBASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 SPDYE8P-202ENST00000612377 668 ntBASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ZNF248Q8NDW4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 MIR943-201ENST00000401286 94 ntBASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 AL355306.1-201ENST00000415580 579 ntBASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 BX276092.7-203ENST00000637198 1536 ntBASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms