Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
PTCHD4Q6ZW05 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 AL671277.2-201ENST00000458060 996 ntBASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 AC022616.7-201ENST00000525383 220 ntBASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.71■□□□□ 0.11
PTCHD4Q6ZW05 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTCHD4Q6ZW05 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
PTCHD4Q6ZW05 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.71■□□□□ 0.1
PTCHD4Q6ZW05 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTCHD4Q6ZW05 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTCHD4Q6ZW05 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PTCHD4Q6ZW05 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.71■□□□□ 0.1
PTCHD4Q6ZW05 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTCHD4Q6ZW05 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTCHD4Q6ZW05 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
PTCHD4Q6ZW05 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTCHD4Q6ZW05 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 AC097374.2-201ENST00000618617 1306 ntBASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 COX5BP2-201ENST00000392354 334 ntBASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 RCN1P1-201ENST00000400413 996 ntBASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.7■□□□□ 0.1
PTCHD4Q6ZW05 IGHV3-52-201ENST00000519770 353 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms