Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX4Q33E94 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFX4Q33E94 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.88■□□□□ 0.13
RFX4Q33E94 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.88■□□□□ 0.13
RFX4Q33E94 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX4Q33E94 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
RFX4Q33E94 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFX4Q33E94 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFX4Q33E94 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX4Q33E94 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.88■□□□□ 0.13
RFX4Q33E94 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFX4Q33E94 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX4Q33E94 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX4Q33E94 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX4Q33E94 FLJ16779-201ENST00000612722 7638 ntBASIC15.88■□□□□ 0.13
RFX4Q33E94 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX4Q33E94 AC113347.1-201ENST00000413321 391 ntBASIC15.88■□□□□ 0.13
RFX4Q33E94 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX4Q33E94 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFX4Q33E94 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RFX4Q33E94 IGHV3-52-201ENST00000519770 353 ntBASIC15.88■□□□□ 0.13
RFX4Q33E94 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RFX4Q33E94 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.88■□□□□ 0.13
RFX4Q33E94 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.88■□□□□ 0.13
RFX4Q33E94 AC005363.2-201ENST00000618631 242 ntBASIC15.88■□□□□ 0.13
RFX4Q33E94 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.88■□□□□ 0.13
RFX4Q33E94 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFX4Q33E94 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.88■□□□□ 0.13
RFX4Q33E94 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX4Q33E94 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.88■□□□□ 0.13
RFX4Q33E94 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.88■□□□□ 0.13
RFX4Q33E94 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX4Q33E94 AC097374.2-201ENST00000618617 1306 ntBASIC15.88■□□□□ 0.13
RFX4Q33E94 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX4Q33E94 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX4Q33E94 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFX4Q33E94 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.88■□□□□ 0.13
RFX4Q33E94 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.88■□□□□ 0.13
RFX4Q33E94 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RFX4Q33E94 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX4Q33E94 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX4Q33E94 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RFX4Q33E94 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 AC006538.1-201ENST00000567905 1585 ntBASIC15.87■□□□□ 0.13
RFX4Q33E94 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.87■□□□□ 0.13
RFX4Q33E94 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RFX4Q33E94 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RFX4Q33E94 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 COX5BP2-201ENST00000392354 334 ntBASIC15.87■□□□□ 0.13
RFX4Q33E94 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.87■□□□□ 0.13
RFX4Q33E94 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.87■□□□□ 0.13
RFX4Q33E94 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.87■□□□□ 0.13
RFX4Q33E94 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.87■□□□□ 0.13
RFX4Q33E94 AC005332.3-201ENST00000589904 676 ntBASIC15.87■□□□□ 0.13
RFX4Q33E94 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.87■□□□□ 0.13
RFX4Q33E94 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 TSPY26P-202ENST00000565928 3884 ntBASIC15.87■□□□□ 0.13
RFX4Q33E94 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.87■□□□□ 0.13
RFX4Q33E94 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.87■□□□□ 0.13
RFX4Q33E94 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.87■□□□□ 0.13
RFX4Q33E94 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.87■□□□□ 0.13
RFX4Q33E94 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 AC063926.3-201ENST00000624734 5658 ntBASIC15.87■□□□□ 0.13
RFX4Q33E94 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RFX4Q33E94 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFX4Q33E94 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.86■□□□□ 0.13
RFX4Q33E94 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX4Q33E94 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX4Q33E94 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFX4Q33E94 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.86■□□□□ 0.13
RFX4Q33E94 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.86■□□□□ 0.13
RFX4Q33E94 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFX4Q33E94 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX4Q33E94 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFX4Q33E94 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFX4Q33E94 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RFX4Q33E94 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX4Q33E94 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.86■□□□□ 0.13
RFX4Q33E94 TERF1P1-201ENST00000311003 1181 ntBASIC15.86■□□□□ 0.13
RFX4Q33E94 HBZP1-201ENST00000354915 429 ntBASIC15.86■□□□□ 0.13
RFX4Q33E94 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms