Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 FRMD8P1-201ENST00000440433 1524 ntBASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.06■□□□□ 0.48
ERCC6LQ2NKX8 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 AL023803.3-201ENST00000615559 522 ntBASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 AC006058.4-201ENST00000624016 1670 ntBASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC6LQ2NKX8 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms