Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.17■□□□□ 0.5
CDR2Q01850 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDR2Q01850 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDR2Q01850 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDR2Q01850 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDR2Q01850 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDR2Q01850 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.17■□□□□ 0.5
CDR2Q01850 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDR2Q01850 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CDR2Q01850 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.16■□□□□ 0.5
CDR2Q01850 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CDR2Q01850 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.16■□□□□ 0.5
CDR2Q01850 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.16■□□□□ 0.5
CDR2Q01850 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CDR2Q01850 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDR2Q01850 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDR2Q01850 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDR2Q01850 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CDR2Q01850 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.16■□□□□ 0.5
CDR2Q01850 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDR2Q01850 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDR2Q01850 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CDR2Q01850 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.16■□□□□ 0.5
CDR2Q01850 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.16■□□□□ 0.5
CDR2Q01850 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.16■□□□□ 0.5
CDR2Q01850 SCARNA2-201ENST00000458748 420 ntBASIC18.16■□□□□ 0.5
CDR2Q01850 AP002490.2-201ENST00000524791 560 ntBASIC18.16■□□□□ 0.5
CDR2Q01850 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.16■□□□□ 0.5
CDR2Q01850 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.16■□□□□ 0.5
CDR2Q01850 LINC01711-201ENST00000598340 967 ntBASIC18.16■□□□□ 0.5
CDR2Q01850 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.16■□□□□ 0.5
CDR2Q01850 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CDR2Q01850 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDR2Q01850 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDR2Q01850 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.16■□□□□ 0.5
CDR2Q01850 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDR2Q01850 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDR2Q01850 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDR2Q01850 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CDR2Q01850 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDR2Q01850 AL645728.1-201ENST00000366221 2101 ntBASIC18.16■□□□□ 0.5
CDR2Q01850 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CDR2Q01850 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDR2Q01850 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDR2Q01850 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
CDR2Q01850 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDR2Q01850 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDR2Q01850 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDR2Q01850 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDR2Q01850 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDR2Q01850 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDR2Q01850 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.15■□□□□ 0.5
CDR2Q01850 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CDR2Q01850 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDR2Q01850 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.15■□□□□ 0.5
CDR2Q01850 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.15■□□□□ 0.5
CDR2Q01850 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.15■□□□□ 0.5
CDR2Q01850 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.15■□□□□ 0.5
CDR2Q01850 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDR2Q01850 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDR2Q01850 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDR2Q01850 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.15■□□□□ 0.5
CDR2Q01850 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.15■□□□□ 0.5
CDR2Q01850 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CDR2Q01850 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDR2Q01850 AF238378.1-201ENST00000526806 358 ntBASIC18.15■□□□□ 0.5
CDR2Q01850 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.15■□□□□ 0.5
CDR2Q01850 AC139887.3-201ENST00000568585 713 ntBASIC18.15■□□□□ 0.5
CDR2Q01850 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.15■□□□□ 0.5
CDR2Q01850 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CDR2Q01850 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDR2Q01850 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDR2Q01850 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDR2Q01850 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.15■□□□□ 0.5
CDR2Q01850 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDR2Q01850 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDR2Q01850 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.15■□□□□ 0.5
CDR2Q01850 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDR2Q01850 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.15■□□□□ 0.5
CDR2Q01850 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDR2Q01850 AL021920.2-201ENST00000624828 1351 ntBASIC18.15■□□□□ 0.5
CDR2Q01850 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDR2Q01850 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.15■□□□□ 0.5
CDR2Q01850 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CDR2Q01850 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDR2Q01850 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDR2Q01850 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CDR2Q01850 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDR2Q01850 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDR2Q01850 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CDR2Q01850 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.14■□□□□ 0.49
CDR2Q01850 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDR2Q01850 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDR2Q01850 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.14■□□□□ 0.49
CDR2Q01850 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDR2Q01850 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDR2Q01850 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDR2Q01850 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.14■□□□□ 0.49
CDR2Q01850 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.14■□□□□ 0.49
CDR2Q01850 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms