Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S1P61966 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S1P61966 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
AP1S1P61966 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
AP1S1P61966 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.1■□□□□ 0.33
AP1S1P61966 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.1■□□□□ 0.33
AP1S1P61966 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
AP1S1P61966 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 MIR940-201ENST00000401276 94 ntBASIC17.1■□□□□ 0.33
AP1S1P61966 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
AP1S1P61966 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.1■□□□□ 0.33
AP1S1P61966 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 KRT18P2-201ENST00000447938 1258 ntBASIC17.1■□□□□ 0.33
AP1S1P61966 POLD2P1-201ENST00000511220 997 ntBASIC17.1■□□□□ 0.33
AP1S1P61966 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
AP1S1P61966 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.1■□□□□ 0.33
AP1S1P61966 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.1■□□□□ 0.33
AP1S1P61966 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.1■□□□□ 0.33
AP1S1P61966 AC007064.4-201ENST00000637740 555 ntBASIC17.1■□□□□ 0.33
AP1S1P61966 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
AP1S1P61966 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.1■□□□□ 0.33
AP1S1P61966 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S1P61966 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S1P61966 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
AP1S1P61966 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S1P61966 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S1P61966 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S1P61966 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S1P61966 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.09■□□□□ 0.33
AP1S1P61966 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S1P61966 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
AP1S1P61966 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.09■□□□□ 0.33
AP1S1P61966 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
AP1S1P61966 HCG4-201ENST00000418983 998 ntBASIC17.09■□□□□ 0.33
AP1S1P61966 MPDU1-223ENST00000582151 728 ntBASIC17.09■□□□□ 0.33
AP1S1P61966 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
AP1S1P61966 AC023141.13-201ENST00000604991 943 ntBASIC17.09■□□□□ 0.33
AP1S1P61966 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.09■□□□□ 0.33
AP1S1P61966 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S1P61966 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.09■□□□□ 0.33
AP1S1P61966 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S1P61966 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S1P61966 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.09■□□□□ 0.33
AP1S1P61966 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.09■□□□□ 0.33
AP1S1P61966 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.09■□□□□ 0.33
AP1S1P61966 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S1P61966 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.09■□□□□ 0.33
AP1S1P61966 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.09■□□□□ 0.33
AP1S1P61966 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.09■□□□□ 0.33
AP1S1P61966 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.09■□□□□ 0.33
AP1S1P61966 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.09■□□□□ 0.33
AP1S1P61966 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S1P61966 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S1P61966 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S1P61966 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S1P61966 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S1P61966 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
AP1S1P61966 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP1S1P61966 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.08■□□□□ 0.33
AP1S1P61966 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP1S1P61966 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP1S1P61966 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP1S1P61966 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP1S1P61966 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
AP1S1P61966 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP1S1P61966 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
AP1S1P61966 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S1P61966 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S1P61966 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S1P61966 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.08■□□□□ 0.32
AP1S1P61966 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.08■□□□□ 0.32
AP1S1P61966 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.08■□□□□ 0.32
AP1S1P61966 PMS2P7-201ENST00000506558 1336 ntBASIC17.08■□□□□ 0.32
AP1S1P61966 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.08■□□□□ 0.32
AP1S1P61966 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S1P61966 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S1P61966 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S1P61966 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S1P61966 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms