Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH12P55289 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH12P55289 KRT8P10-201ENST00000450021 1447 ntBASIC15.92■□□□□ 0.14
CDH12P55289 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH12P55289 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH12P55289 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH12P55289 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH12P55289 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH12P55289 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH12P55289 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH12P55289 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH12P55289 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CDH12P55289 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH12P55289 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH12P55289 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
CDH12P55289 NFIC-211ENST00000641145 8399 ntBASIC15.91■□□□□ 0.14
CDH12P55289 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CDH12P55289 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH12P55289 AC026691.1-201ENST00000602502 2017 ntBASIC15.91■□□□□ 0.14
CDH12P55289 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH12P55289 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH12P55289 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH12P55289 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH12P55289 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH12P55289 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH12P55289 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.91■□□□□ 0.14
CDH12P55289 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.91■□□□□ 0.14
CDH12P55289 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH12P55289 AC111152.3-201ENST00000569699 673 ntBASIC15.91■□□□□ 0.14
CDH12P55289 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.91■□□□□ 0.14
CDH12P55289 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CDH12P55289 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH12P55289 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.91■□□□□ 0.14
CDH12P55289 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH12P55289 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH12P55289 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH12P55289 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.91■□□□□ 0.14
CDH12P55289 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH12P55289 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.91■□□□□ 0.14
CDH12P55289 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH12P55289 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH12P55289 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.91■□□□□ 0.14
CDH12P55289 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH12P55289 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH12P55289 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH12P55289 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH12P55289 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH12P55289 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CDH12P55289 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
CDH12P55289 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 VENTXP7-201ENST00000475503 772 ntBASIC15.9■□□□□ 0.14
CDH12P55289 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.9■□□□□ 0.14
CDH12P55289 AP005901.3-202ENST00000581653 237 ntBASIC15.9■□□□□ 0.14
CDH12P55289 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CDH12P55289 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CDH12P55289 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CDH12P55289 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH12P55289 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH12P55289 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH12P55289 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH12P55289 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH12P55289 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH12P55289 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH12P55289 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH12P55289 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH12P55289 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH12P55289 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH12P55289 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH12P55289 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH12P55289 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH12P55289 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH12P55289 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH12P55289 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CDH12P55289 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH12P55289 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CDH12P55289 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH12P55289 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH12P55289 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms