Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.21■□□□□ 0.51
RAD23BP54727 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAD23BP54727 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAD23BP54727 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAD23BP54727 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAD23BP54727 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.21■□□□□ 0.51
RAD23BP54727 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAD23BP54727 PI4KAP1-204ENST00000612579 1703 ntBASIC18.21■□□□□ 0.51
RAD23BP54727 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.21■□□□□ 0.51
RAD23BP54727 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAD23BP54727 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAD23BP54727 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
RAD23BP54727 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.21■□□□□ 0.51
RAD23BP54727 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAD23BP54727 AC079776.4-201ENST00000511039 504 ntBASIC18.21■□□□□ 0.51
RAD23BP54727 IGHV3-65-201ENST00000523210 341 ntBASIC18.21■□□□□ 0.51
RAD23BP54727 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
RAD23BP54727 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.21■□□□□ 0.51
RAD23BP54727 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.21■□□□□ 0.51
RAD23BP54727 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.21■□□□□ 0.51
RAD23BP54727 PGM5P2-202ENST00000637225 1043 ntBASIC18.21■□□□□ 0.51
RAD23BP54727 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.21■□□□□ 0.51
RAD23BP54727 AC092068.3-201ENST00000587894 2016 ntBASIC18.21■□□□□ 0.51
RAD23BP54727 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAD23BP54727 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAD23BP54727 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.21■□□□□ 0.51
RAD23BP54727 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
RAD23BP54727 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAD23BP54727 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.2■□□□□ 0.5
RAD23BP54727 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.2■□□□□ 0.5
RAD23BP54727 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
RAD23BP54727 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAD23BP54727 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.2■□□□□ 0.5
RAD23BP54727 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAD23BP54727 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAD23BP54727 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAD23BP54727 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RAD23BP54727 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAD23BP54727 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.2■□□□□ 0.5
RAD23BP54727 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RAD23BP54727 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.2■□□□□ 0.5
RAD23BP54727 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.2■□□□□ 0.5
RAD23BP54727 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.2■□□□□ 0.5
RAD23BP54727 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.2■□□□□ 0.5
RAD23BP54727 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.2■□□□□ 0.5
RAD23BP54727 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.2■□□□□ 0.5
RAD23BP54727 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.2■□□□□ 0.5
RAD23BP54727 AC005593.1-201ENST00000624894 515 ntBASIC18.2■□□□□ 0.5
RAD23BP54727 AF228730.7-201ENST00000641842 219 ntBASIC18.2■□□□□ 0.5
RAD23BP54727 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAD23BP54727 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAD23BP54727 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.2■□□□□ 0.5
RAD23BP54727 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAD23BP54727 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAD23BP54727 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAD23BP54727 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAD23BP54727 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAD23BP54727 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.2■□□□□ 0.5
RAD23BP54727 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAD23BP54727 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RAD23BP54727 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAD23BP54727 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAD23BP54727 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.19■□□□□ 0.5
RAD23BP54727 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAD23BP54727 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RAD23BP54727 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAD23BP54727 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.19■□□□□ 0.5
RAD23BP54727 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RAD23BP54727 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
RAD23BP54727 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
RAD23BP54727 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.19■□□□□ 0.5
RAD23BP54727 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.19■□□□□ 0.5
RAD23BP54727 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.19■□□□□ 0.5
RAD23BP54727 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.19■□□□□ 0.5
RAD23BP54727 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAD23BP54727 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.19■□□□□ 0.5
RAD23BP54727 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.19■□□□□ 0.5
RAD23BP54727 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAD23BP54727 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAD23BP54727 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAD23BP54727 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RAD23BP54727 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAD23BP54727 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAD23BP54727 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAD23BP54727 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAD23BP54727 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAD23BP54727 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAD23BP54727 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAD23BP54727 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
RAD23BP54727 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAD23BP54727 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.18■□□□□ 0.5
RAD23BP54727 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RAD23BP54727 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAD23BP54727 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RAD23BP54727 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAD23BP54727 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAD23BP54727 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAD23BP54727 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.18■□□□□ 0.5
RAD23BP54727 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAD23BP54727 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms