Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGA2P52926 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.54■□□□□ 0.08
HMGA2P52926 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGA2P52926 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
HMGA2P52926 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGA2P52926 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGA2P52926 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGA2P52926 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGA2P52926 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
HMGA2P52926 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGA2P52926 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGA2P52926 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
HMGA2P52926 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGA2P52926 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGA2P52926 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
HMGA2P52926 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGA2P52926 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGA2P52926 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HMGA2P52926 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HMGA2P52926 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HMGA2P52926 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGA2P52926 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HMGA2P52926 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.53■□□□□ 0.08
HMGA2P52926 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HMGA2P52926 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 SPDYE21P-201ENST00000413323 827 ntBASIC15.53■□□□□ 0.08
HMGA2P52926 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGA2P52926 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.53■□□□□ 0.08
HMGA2P52926 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGA2P52926 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGA2P52926 AC022616.7-201ENST00000525383 220 ntBASIC15.53■□□□□ 0.08
HMGA2P52926 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGA2P52926 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.53■□□□□ 0.08
HMGA2P52926 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGA2P52926 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGA2P52926 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGA2P52926 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGA2P52926 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.53■□□□□ 0.08
HMGA2P52926 AC004817.3-201ENST00000602957 2129 ntBASIC15.53■□□□□ 0.08
HMGA2P52926 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGA2P52926 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGA2P52926 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGA2P52926 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
HMGA2P52926 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGA2P52926 AC024909.3-201ENST00000611513 2257 ntBASIC15.52■□□□□ 0.08
HMGA2P52926 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.52■□□□□ 0.08
HMGA2P52926 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGA2P52926 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HMGA2P52926 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HMGA2P52926 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.52■□□□□ 0.08
HMGA2P52926 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGA2P52926 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGA2P52926 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGA2P52926 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGA2P52926 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HMGA2P52926 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.52■□□□□ 0.08
HMGA2P52926 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.52■□□□□ 0.08
HMGA2P52926 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HMGA2P52926 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
HMGA2P52926 LINC01238-205ENST00000567549 1107 ntBASIC15.52■□□□□ 0.08
HMGA2P52926 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms