Protein–RNA interactions for Protein: P49593

PPM1F, Protein phosphatase 1F, humanhuman

Predicted RBP Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1FP49593 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PPM1FP49593 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PPM1FP49593 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PPM1FP49593 MRPL20P1-201ENST00000400819 433 ntBASIC16.78■□□□□ 0.28
PPM1FP49593 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.78■□□□□ 0.28
PPM1FP49593 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PPM1FP49593 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PPM1FP49593 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.78■□□□□ 0.28
PPM1FP49593 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
PPM1FP49593 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.78■□□□□ 0.28
PPM1FP49593 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.78■□□□□ 0.28
PPM1FP49593 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PPM1FP49593 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.78■□□□□ 0.28
PPM1FP49593 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PPM1FP49593 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PPM1FP49593 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PPM1FP49593 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PPM1FP49593 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PPM1FP49593 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.78■□□□□ 0.28
PPM1FP49593 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PPM1FP49593 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.78■□□□□ 0.28
PPM1FP49593 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PPM1FP49593 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PPM1FP49593 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PPM1FP49593 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.77■□□□□ 0.28
PPM1FP49593 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PPM1FP49593 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PPM1FP49593 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PPM1FP49593 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PPM1FP49593 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PPM1FP49593 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PPM1FP49593 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PPM1FP49593 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PPM1FP49593 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PPM1FP49593 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PPM1FP49593 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PPM1FP49593 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PPM1FP49593 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PPM1FP49593 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.77■□□□□ 0.28
PPM1FP49593 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.77■□□□□ 0.28
PPM1FP49593 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.77■□□□□ 0.28
PPM1FP49593 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.77■□□□□ 0.28
PPM1FP49593 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.77■□□□□ 0.28
PPM1FP49593 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.77■□□□□ 0.28
PPM1FP49593 AC018845.2-201ENST00000568326 409 ntBASIC16.77■□□□□ 0.28
PPM1FP49593 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.77■□□□□ 0.28
PPM1FP49593 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PPM1FP49593 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PPM1FP49593 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.77■□□□□ 0.28
PPM1FP49593 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PPM1FP49593 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
PPM1FP49593 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PPM1FP49593 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PPM1FP49593 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
PPM1FP49593 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PPM1FP49593 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
PPM1FP49593 BICD1-207ENST00000551848 1962 ntBASIC16.77■□□□□ 0.27
PPM1FP49593 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
PPM1FP49593 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.77■□□□□ 0.27
PPM1FP49593 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PPM1FP49593 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PPM1FP49593 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PPM1FP49593 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.76■□□□□ 0.27
PPM1FP49593 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PPM1FP49593 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPM1FP49593 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.76■□□□□ 0.27
PPM1FP49593 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPM1FP49593 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPM1FP49593 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PPM1FP49593 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPM1FP49593 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PPM1FP49593 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.76■□□□□ 0.27
PPM1FP49593 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPM1FP49593 PTCHD3P3-201ENST00000403073 906 ntBASIC16.76■□□□□ 0.27
PPM1FP49593 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.76■□□□□ 0.27
PPM1FP49593 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.76■□□□□ 0.27
PPM1FP49593 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.76■□□□□ 0.27
PPM1FP49593 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PPM1FP49593 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.76■□□□□ 0.27
PPM1FP49593 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.76■□□□□ 0.27
PPM1FP49593 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PPM1FP49593 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.76■□□□□ 0.27
PPM1FP49593 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.76■□□□□ 0.27
PPM1FP49593 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PPM1FP49593 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
PPM1FP49593 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.76■□□□□ 0.27
PPM1FP49593 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPM1FP49593 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPM1FP49593 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPM1FP49593 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
PPM1FP49593 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PPM1FP49593 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.76■□□□□ 0.27
PPM1FP49593 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.76■□□□□ 0.27
PPM1FP49593 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PPM1FP49593 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.75■□□□□ 0.27
PPM1FP49593 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PPM1FP49593 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPM1FP49593 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPM1FP49593 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPM1FP49593 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms