Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SOX2P48431 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
SOX2P48431 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SOX2P48431 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.04■□□□□ -0
SOX2P48431 AL391005.1-201ENST00000623953 2435 ntBASIC15.04■□□□□ -0
SOX2P48431 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.04■□□□□ -0
SOX2P48431 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
SOX2P48431 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SOX2P48431 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.04■□□□□ -0
SOX2P48431 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.04■□□□□ -0
SOX2P48431 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.04■□□□□ -0
SOX2P48431 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.04■□□□□ -0
SOX2P48431 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SOX2P48431 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.04■□□□□ -0
SOX2P48431 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.04■□□□□ -0
SOX2P48431 KRT8P10-201ENST00000450021 1447 ntBASIC15.04■□□□□ -0
SOX2P48431 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
SOX2P48431 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.04■□□□□ -0
SOX2P48431 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.04■□□□□ -0
SOX2P48431 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.04■□□□□ -0
SOX2P48431 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SOX2P48431 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.04■□□□□ -0
SOX2P48431 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.04■□□□□ -0
SOX2P48431 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
SOX2P48431 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SOX2P48431 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SOX2P48431 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SOX2P48431 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SOX2P48431 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.04■□□□□ -0
SOX2P48431 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.04■□□□□ -0
SOX2P48431 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.04■□□□□ -0
SOX2P48431 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SOX2P48431 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.04■□□□□ -0
SOX2P48431 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
SOX2P48431 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SOX2P48431 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.04■□□□□ -0
SOX2P48431 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SOX2P48431 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
SOX2P48431 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.04■□□□□ -0
SOX2P48431 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.04■□□□□ -0
SOX2P48431 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SOX2P48431 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SOX2P48431 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.03■□□□□ -0
SOX2P48431 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SOX2P48431 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.03■□□□□ -0
SOX2P48431 AL049757.1-201ENST00000616842 1596 ntBASIC15.03■□□□□ -0
SOX2P48431 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.03■□□□□ -0
SOX2P48431 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SOX2P48431 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.03■□□□□ -0
SOX2P48431 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.03■□□□□ -0
SOX2P48431 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
SOX2P48431 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SOX2P48431 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SOX2P48431 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SOX2P48431 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.03■□□□□ -0
SOX2P48431 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.03■□□□□ -0
SOX2P48431 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SOX2P48431 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SOX2P48431 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SOX2P48431 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.03■□□□□ -0
SOX2P48431 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
SOX2P48431 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.03■□□□□ -0
SOX2P48431 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
SOX2P48431 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.03■□□□□ -0
SOX2P48431 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
SOX2P48431 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.03■□□□□ -0
SOX2P48431 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SOX2P48431 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SOX2P48431 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.03■□□□□ -0
SOX2P48431 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.03■□□□□ -0
SOX2P48431 NORAD-201ENST00000565493 5339 ntBASIC15.03■□□□□ -0
SOX2P48431 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.03■□□□□ -0
SOX2P48431 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.03■□□□□ -0
SOX2P48431 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SOX2P48431 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SOX2P48431 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SOX2P48431 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SOX2P48431 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.02■□□□□ -0
SOX2P48431 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SOX2P48431 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.02■□□□□ -0
SOX2P48431 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SOX2P48431 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SOX2P48431 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.02■□□□□ -0
SOX2P48431 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.02■□□□□ -0
SOX2P48431 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SOX2P48431 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SOX2P48431 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.02■□□□□ -0
SOX2P48431 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SOX2P48431 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.02■□□□□ -0
SOX2P48431 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SOX2P48431 TERF1P1-201ENST00000311003 1181 ntBASIC15.02■□□□□ -0
SOX2P48431 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SOX2P48431 AC113347.1-201ENST00000413321 391 ntBASIC15.02■□□□□ -0
SOX2P48431 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.02■□□□□ -0
SOX2P48431 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.02■□□□□ -0
SOX2P48431 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.02■□□□□ -0
SOX2P48431 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.02■□□□□ -0
SOX2P48431 AC005363.2-201ENST00000618631 242 ntBASIC15.02■□□□□ -0
SOX2P48431 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
SOX2P48431 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms