Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.97■□□□□ 0.31
CAPNS1P04632 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.97■□□□□ 0.31
CAPNS1P04632 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CAPNS1P04632 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CAPNS1P04632 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CAPNS1P04632 PCDHA14-201ENST00000506751 2298 ntBASIC16.97■□□□□ 0.31
CAPNS1P04632 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPNS1P04632 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.97■□□□□ 0.31
CAPNS1P04632 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.97■□□□□ 0.31
CAPNS1P04632 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.97■□□□□ 0.31
CAPNS1P04632 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CAPNS1P04632 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.97■□□□□ 0.31
CAPNS1P04632 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CAPNS1P04632 AL078644.1-201ENST00000609881 752 ntBASIC16.97■□□□□ 0.31
CAPNS1P04632 AC093512.1-201ENST00000617969 520 ntBASIC16.97■□□□□ 0.31
CAPNS1P04632 AC009154.2-201ENST00000621177 724 ntBASIC16.97■□□□□ 0.31
CAPNS1P04632 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPNS1P04632 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPNS1P04632 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.97■□□□□ 0.31
CAPNS1P04632 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPNS1P04632 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CAPNS1P04632 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPNS1P04632 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.97■□□□□ 0.31
CAPNS1P04632 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.97■□□□□ 0.31
CAPNS1P04632 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.97■□□□□ 0.31
CAPNS1P04632 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.96■□□□□ 0.31
CAPNS1P04632 AL163051.1-201ENST00000569214 1512 ntBASIC16.96■□□□□ 0.31
CAPNS1P04632 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CAPNS1P04632 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.96■□□□□ 0.31
CAPNS1P04632 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CAPNS1P04632 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.96■□□□□ 0.31
CAPNS1P04632 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.96■□□□□ 0.31
CAPNS1P04632 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CAPNS1P04632 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CAPNS1P04632 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CAPNS1P04632 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPNS1P04632 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPNS1P04632 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CAPNS1P04632 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.96■□□□□ 0.31
CAPNS1P04632 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.96■□□□□ 0.31
CAPNS1P04632 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CAPNS1P04632 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPNS1P04632 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPNS1P04632 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPNS1P04632 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CAPNS1P04632 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.96■□□□□ 0.31
CAPNS1P04632 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CAPNS1P04632 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.96■□□□□ 0.31
CAPNS1P04632 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.96■□□□□ 0.31
CAPNS1P04632 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.96■□□□□ 0.31
CAPNS1P04632 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.96■□□□□ 0.31
CAPNS1P04632 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.96■□□□□ 0.31
CAPNS1P04632 MIR4745-201ENST00000577608 62 ntBASIC16.96■□□□□ 0.31
CAPNS1P04632 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CAPNS1P04632 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.96■□□□□ 0.31
CAPNS1P04632 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.96■□□□□ 0.31
CAPNS1P04632 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CAPNS1P04632 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPNS1P04632 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.96■□□□□ 0.31
CAPNS1P04632 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPNS1P04632 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CAPNS1P04632 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CAPNS1P04632 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPNS1P04632 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CAPNS1P04632 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
CAPNS1P04632 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.96■□□□□ 0.31
CAPNS1P04632 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CAPNS1P04632 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CAPNS1P04632 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPNS1P04632 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.95■□□□□ 0.3
CAPNS1P04632 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPNS1P04632 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPNS1P04632 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.95■□□□□ 0.3
CAPNS1P04632 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPNS1P04632 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAPNS1P04632 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPNS1P04632 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CAPNS1P04632 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPNS1P04632 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPNS1P04632 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.95■□□□□ 0.3
CAPNS1P04632 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAPNS1P04632 AC015922.1-201ENST00000421102 1152 ntBASIC16.95■□□□□ 0.3
CAPNS1P04632 AC005034.1-201ENST00000426657 489 ntBASIC16.95■□□□□ 0.3
CAPNS1P04632 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.95■□□□□ 0.3
CAPNS1P04632 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.95■□□□□ 0.3
CAPNS1P04632 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.95■□□□□ 0.3
CAPNS1P04632 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAPNS1P04632 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.95■□□□□ 0.3
CAPNS1P04632 AC005498.2-205ENST00000593218 784 ntBASIC16.95■□□□□ 0.3
CAPNS1P04632 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.95■□□□□ 0.3
CAPNS1P04632 Z92544.3-201ENST00000624747 417 ntBASIC16.95■□□□□ 0.3
CAPNS1P04632 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CAPNS1P04632 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPNS1P04632 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.95■□□□□ 0.3
CAPNS1P04632 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPNS1P04632 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.95■□□□□ 0.3
CAPNS1P04632 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.95■□□□□ 0.3
CAPNS1P04632 AC079776.2-201ENST00000641154 1609 ntBASIC16.95■□□□□ 0.3
CAPNS1P04632 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAPNS1P04632 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms