Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.89■□□□□ 0.13
SOX30O94993 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.89■□□□□ 0.13
SOX30O94993 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SOX30O94993 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.89■□□□□ 0.13
SOX30O94993 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX30O94993 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX30O94993 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.89■□□□□ 0.13
SOX30O94993 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX30O94993 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SOX30O94993 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.89■□□□□ 0.13
SOX30O94993 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX30O94993 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SOX30O94993 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.89■□□□□ 0.13
SOX30O94993 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
SOX30O94993 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.89■□□□□ 0.13
SOX30O94993 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SOX30O94993 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX30O94993 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX30O94993 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SOX30O94993 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX30O94993 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX30O94993 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX30O94993 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.89■□□□□ 0.13
SOX30O94993 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SOX30O94993 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SOX30O94993 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SOX30O94993 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.88■□□□□ 0.13
SOX30O94993 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX30O94993 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX30O94993 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.88■□□□□ 0.13
SOX30O94993 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX30O94993 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SOX30O94993 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SOX30O94993 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX30O94993 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX30O94993 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX30O94993 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX30O94993 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.88■□□□□ 0.13
SOX30O94993 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.88■□□□□ 0.13
SOX30O94993 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX30O94993 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
SOX30O94993 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.88■□□□□ 0.13
SOX30O94993 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.88■□□□□ 0.13
SOX30O94993 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.88■□□□□ 0.13
SOX30O94993 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.88■□□□□ 0.13
SOX30O94993 FGFR3P6-201ENST00000457012 610 ntBASIC15.88■□□□□ 0.13
SOX30O94993 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.88■□□□□ 0.13
SOX30O94993 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.88■□□□□ 0.13
SOX30O94993 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SOX30O94993 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.88■□□□□ 0.13
SOX30O94993 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.88■□□□□ 0.13
SOX30O94993 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.88■□□□□ 0.13
SOX30O94993 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX30O94993 RN7SL510P-201ENST00000581311 263 ntBASIC15.88■□□□□ 0.13
SOX30O94993 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.88■□□□□ 0.13
SOX30O94993 AL139424.1-201ENST00000607572 797 ntBASIC15.88■□□□□ 0.13
SOX30O94993 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX30O94993 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX30O94993 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX30O94993 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX30O94993 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX30O94993 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX30O94993 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SOX30O94993 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SOX30O94993 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
SOX30O94993 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SOX30O94993 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX30O94993 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX30O94993 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX30O94993 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX30O94993 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX30O94993 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX30O94993 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.87■□□□□ 0.13
SOX30O94993 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX30O94993 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX30O94993 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX30O94993 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX30O94993 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SOX30O94993 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX30O94993 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX30O94993 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SOX30O94993 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX30O94993 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX30O94993 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.87■□□□□ 0.13
SOX30O94993 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.87■□□□□ 0.13
SOX30O94993 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.87■□□□□ 0.13
SOX30O94993 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.87■□□□□ 0.13
SOX30O94993 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.87■□□□□ 0.13
SOX30O94993 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SOX30O94993 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.87■□□□□ 0.13
SOX30O94993 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.87■□□□□ 0.13
SOX30O94993 AC006557.2-201ENST00000592985 1240 ntBASIC15.87■□□□□ 0.13
SOX30O94993 TERC-201ENST00000602385 541 ntBASIC15.87■□□□□ 0.13
SOX30O94993 AL732292.2-201ENST00000609649 430 ntBASIC15.87■□□□□ 0.13
SOX30O94993 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX30O94993 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX30O94993 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SOX30O94993 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX30O94993 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SOX30O94993 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms