Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP1O94782 AC092119.3-201ENST00000612618 583 ntBASIC17.29■□□□□ 0.36
USP1O94782 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.29■□□□□ 0.36
USP1O94782 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.29■□□□□ 0.36
USP1O94782 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.29■□□□□ 0.36
USP1O94782 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
USP1O94782 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP1O94782 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
USP1O94782 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP1O94782 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP1O94782 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP1O94782 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP1O94782 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
USP1O94782 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP1O94782 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP1O94782 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
USP1O94782 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP1O94782 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.28■□□□□ 0.36
USP1O94782 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP1O94782 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
USP1O94782 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP1O94782 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP1O94782 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP1O94782 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
USP1O94782 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.28■□□□□ 0.36
USP1O94782 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.28■□□□□ 0.36
USP1O94782 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.28■□□□□ 0.36
USP1O94782 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.28■□□□□ 0.36
USP1O94782 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
USP1O94782 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.28■□□□□ 0.36
USP1O94782 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.28■□□□□ 0.36
USP1O94782 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
USP1O94782 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.28■□□□□ 0.36
USP1O94782 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
USP1O94782 HCG4P8-203ENST00000443049 980 ntBASIC17.28■□□□□ 0.36
USP1O94782 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.28■□□□□ 0.36
USP1O94782 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.28■□□□□ 0.36
USP1O94782 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.28■□□□□ 0.36
USP1O94782 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.28■□□□□ 0.36
USP1O94782 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
USP1O94782 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP1O94782 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.28■□□□□ 0.36
USP1O94782 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.28■□□□□ 0.36
USP1O94782 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP1O94782 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
USP1O94782 SIGLEC16-201ENST00000599858 1437 ntBASIC17.28■□□□□ 0.36
USP1O94782 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP1O94782 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP1O94782 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP1O94782 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.28■□□□□ 0.36
USP1O94782 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
USP1O94782 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP1O94782 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.28■□□□□ 0.36
USP1O94782 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
USP1O94782 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP1O94782 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP1O94782 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.27■□□□□ 0.36
USP1O94782 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USP1O94782 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP1O94782 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP1O94782 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USP1O94782 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP1O94782 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP1O94782 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USP1O94782 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP1O94782 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
USP1O94782 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP1O94782 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
USP1O94782 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP1O94782 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP1O94782 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP1O94782 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.27■□□□□ 0.36
USP1O94782 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.27■□□□□ 0.36
USP1O94782 NUS1P1-201ENST00000446295 882 ntBASIC17.27■□□□□ 0.36
USP1O94782 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.27■□□□□ 0.36
USP1O94782 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.27■□□□□ 0.36
USP1O94782 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.27■□□□□ 0.36
USP1O94782 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.27■□□□□ 0.36
USP1O94782 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
USP1O94782 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
USP1O94782 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
USP1O94782 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP1O94782 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
USP1O94782 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP1O94782 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.27■□□□□ 0.35
USP1O94782 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
USP1O94782 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.26■□□□□ 0.35
USP1O94782 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP1O94782 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
USP1O94782 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP1O94782 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.26■□□□□ 0.35
USP1O94782 LINC00554-201ENST00000564841 3011 ntBASIC17.26■□□□□ 0.35
USP1O94782 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP1O94782 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
USP1O94782 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP1O94782 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP1O94782 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP1O94782 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP1O94782 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP1O94782 ABCD1P5-201ENST00000445663 754 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms