Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.84□□□□□ -0.03
XRCC2O43543 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
XRCC2O43543 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
XRCC2O43543 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
XRCC2O43543 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
XRCC2O43543 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.83□□□□□ -0.04
XRCC2O43543 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.83□□□□□ -0.04
XRCC2O43543 AC105020.1-201ENST00000435356 2205 ntBASIC14.83□□□□□ -0.04
XRCC2O43543 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
XRCC2O43543 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
XRCC2O43543 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
XRCC2O43543 TSPY19P-201ENST00000418461 509 ntBASIC14.83□□□□□ -0.04
XRCC2O43543 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.83□□□□□ -0.04
XRCC2O43543 TSPY18P-201ENST00000441642 509 ntBASIC14.83□□□□□ -0.04
XRCC2O43543 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.83□□□□□ -0.04
XRCC2O43543 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.83□□□□□ -0.04
XRCC2O43543 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.83□□□□□ -0.04
XRCC2O43543 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.83□□□□□ -0.04
XRCC2O43543 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.83□□□□□ -0.04
XRCC2O43543 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.83□□□□□ -0.04
XRCC2O43543 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.83□□□□□ -0.04
XRCC2O43543 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
XRCC2O43543 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.83□□□□□ -0.04
XRCC2O43543 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
XRCC2O43543 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.83□□□□□ -0.04
XRCC2O43543 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.83□□□□□ -0.04
XRCC2O43543 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.83□□□□□ -0.04
XRCC2O43543 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
XRCC2O43543 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
XRCC2O43543 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
XRCC2O43543 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
XRCC2O43543 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.83□□□□□ -0.04
XRCC2O43543 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
XRCC2O43543 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
XRCC2O43543 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
XRCC2O43543 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.83□□□□□ -0.04
XRCC2O43543 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
XRCC2O43543 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
XRCC2O43543 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
XRCC2O43543 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
XRCC2O43543 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
XRCC2O43543 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
XRCC2O43543 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
XRCC2O43543 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
XRCC2O43543 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.82□□□□□ -0.04
XRCC2O43543 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
XRCC2O43543 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 AC005915.1-201ENST00000624912 2018 ntBASIC14.82□□□□□ -0.04
XRCC2O43543 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
XRCC2O43543 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.82□□□□□ -0.04
XRCC2O43543 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.82□□□□□ -0.04
XRCC2O43543 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.82□□□□□ -0.04
XRCC2O43543 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 SCARNA2-201ENST00000458748 420 ntBASIC14.82□□□□□ -0.04
XRCC2O43543 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
XRCC2O43543 BX005266.1-201ENST00000473402 457 ntBASIC14.82□□□□□ -0.04
XRCC2O43543 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
XRCC2O43543 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
XRCC2O43543 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.82□□□□□ -0.04
XRCC2O43543 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 MTDHP3-201ENST00000594186 672 ntBASIC14.82□□□□□ -0.04
XRCC2O43543 AL355877.3-201ENST00000622820 899 ntBASIC14.82□□□□□ -0.04
XRCC2O43543 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.82□□□□□ -0.04
XRCC2O43543 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.82□□□□□ -0.04
XRCC2O43543 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
XRCC2O43543 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.82□□□□□ -0.04
XRCC2O43543 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms