Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.17■□□□□ 0.18
UPK1AO00322 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.17■□□□□ 0.18
UPK1AO00322 AC106795.1-205ENST00000512851 1056 ntBASIC16.17■□□□□ 0.18
UPK1AO00322 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
UPK1AO00322 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.17■□□□□ 0.18
UPK1AO00322 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
UPK1AO00322 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.17■□□□□ 0.18
UPK1AO00322 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.17■□□□□ 0.18
UPK1AO00322 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1AO00322 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.17■□□□□ 0.18
UPK1AO00322 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.17■□□□□ 0.18
UPK1AO00322 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
UPK1AO00322 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.17■□□□□ 0.18
UPK1AO00322 LINC00554-201ENST00000564841 3011 ntBASIC16.17■□□□□ 0.18
UPK1AO00322 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.17■□□□□ 0.18
UPK1AO00322 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
UPK1AO00322 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
UPK1AO00322 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1AO00322 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1AO00322 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
UPK1AO00322 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1AO00322 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1AO00322 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1AO00322 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.17■□□□□ 0.18
UPK1AO00322 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1AO00322 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1AO00322 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1AO00322 AC132872.4-202ENST00000622924 2756 ntBASIC16.16■□□□□ 0.18
UPK1AO00322 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1AO00322 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.16■□□□□ 0.18
UPK1AO00322 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1AO00322 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
UPK1AO00322 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1AO00322 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1AO00322 AC079328.2-201ENST00000561241 3354 ntBASIC16.16■□□□□ 0.18
UPK1AO00322 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.16■□□□□ 0.18
UPK1AO00322 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1AO00322 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
UPK1AO00322 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1AO00322 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1AO00322 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.16■□□□□ 0.18
UPK1AO00322 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1AO00322 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.16■□□□□ 0.18
UPK1AO00322 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.16■□□□□ 0.18
UPK1AO00322 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.16■□□□□ 0.18
UPK1AO00322 AC124947.2-201ENST00000547118 1133 ntBASIC16.16■□□□□ 0.18
UPK1AO00322 PRELID1P1-202ENST00000567272 903 ntBASIC16.16■□□□□ 0.18
UPK1AO00322 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1AO00322 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1AO00322 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1AO00322 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1AO00322 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
UPK1AO00322 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1AO00322 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
UPK1AO00322 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.16■□□□□ 0.18
UPK1AO00322 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1AO00322 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1AO00322 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1AO00322 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1AO00322 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1AO00322 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
UPK1AO00322 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1AO00322 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1AO00322 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
UPK1AO00322 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1AO00322 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1AO00322 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1AO00322 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.15■□□□□ 0.18
UPK1AO00322 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1AO00322 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1AO00322 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.15■□□□□ 0.18
UPK1AO00322 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1AO00322 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1AO00322 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1AO00322 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1AO00322 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
UPK1AO00322 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1AO00322 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1AO00322 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
UPK1AO00322 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.15■□□□□ 0.18
UPK1AO00322 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1AO00322 EGFEM1P-202ENST00000431685 1563 ntBASIC16.15■□□□□ 0.18
UPK1AO00322 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.15■□□□□ 0.18
UPK1AO00322 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.15■□□□□ 0.18
UPK1AO00322 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1AO00322 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
UPK1AO00322 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.15■□□□□ 0.18
UPK1AO00322 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.15■□□□□ 0.18
UPK1AO00322 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.15■□□□□ 0.18
UPK1AO00322 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.15■□□□□ 0.18
UPK1AO00322 AC091304.2-201ENST00000564639 760 ntBASIC16.15■□□□□ 0.18
UPK1AO00322 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.15■□□□□ 0.18
UPK1AO00322 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1AO00322 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1AO00322 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1AO00322 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.15■□□□□ 0.18
UPK1AO00322 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.15■□□□□ 0.18
UPK1AO00322 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1AO00322 AC004817.3-201ENST00000602957 2129 ntBASIC16.15■□□□□ 0.18
UPK1AO00322 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms