Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.47■□□□□ 0.39
FNDC3AQ9Y2H6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 DNAJB3-202ENST00000449667 1266 ntBASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 STK19B-204ENST00000512515 211 ntBASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 MIR1199-201ENST00000621445 119 ntBASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC3AQ9Y2H6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 AC046185.3-201ENST00000623228 1824 ntBASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 MYCLP1-201ENST00000372451 1075 ntBASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 KRT18P27-201ENST00000427733 1299 ntBASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 AC064836.3-201ENST00000607928 673 ntBASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
FNDC3AQ9Y2H6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FNDC3AQ9Y2H6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FNDC3AQ9Y2H6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
FNDC3AQ9Y2H6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.44■□□□□ 0.38
FNDC3AQ9Y2H6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.44■□□□□ 0.38
FNDC3AQ9Y2H6 AL353593.2-201ENST00000602529 1483 ntBASIC17.44■□□□□ 0.38
FNDC3AQ9Y2H6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.44■□□□□ 0.38
FNDC3AQ9Y2H6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
FNDC3AQ9Y2H6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FNDC3AQ9Y2H6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FNDC3AQ9Y2H6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
FNDC3AQ9Y2H6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FNDC3AQ9Y2H6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms