Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF6Q9Y252 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF6Q9Y252 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF6Q9Y252 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF6Q9Y252 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF6Q9Y252 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF6Q9Y252 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF6Q9Y252 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF6Q9Y252 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF6Q9Y252 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF6Q9Y252 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 DDX43P3-201ENST00000441064 443 ntBASIC16.11■□□□□ 0.17
RNF6Q9Y252 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF6Q9Y252 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 AC008687.5-201ENST00000593746 558 ntBASIC16.11■□□□□ 0.17
RNF6Q9Y252 AL671883.3-201ENST00000603274 991 ntBASIC16.11■□□□□ 0.17
RNF6Q9Y252 AC114341.1-201ENST00000618070 349 ntBASIC16.11■□□□□ 0.17
RNF6Q9Y252 AF228730.7-201ENST00000641842 219 ntBASIC16.11■□□□□ 0.17
RNF6Q9Y252 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF6Q9Y252 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF6Q9Y252 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF6Q9Y252 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RNF6Q9Y252 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF6Q9Y252 AL596257.1-201ENST00000641463 2694 ntBASIC16.11■□□□□ 0.17
RNF6Q9Y252 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF6Q9Y252 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF6Q9Y252 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF6Q9Y252 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF6Q9Y252 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF6Q9Y252 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF6Q9Y252 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RNF6Q9Y252 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 KRT18P67-201ENST00000432816 1264 ntBASIC16.1■□□□□ 0.17
RNF6Q9Y252 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.1■□□□□ 0.17
RNF6Q9Y252 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.1■□□□□ 0.17
RNF6Q9Y252 AC113404.2-201ENST00000507884 177 ntBASIC16.1■□□□□ 0.17
RNF6Q9Y252 RNA5SP419-201ENST00000515908 135 ntBASIC16.1■□□□□ 0.17
RNF6Q9Y252 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RNF6Q9Y252 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF6Q9Y252 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF6Q9Y252 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF6Q9Y252 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
RNF6Q9Y252 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 IL9RP2-201ENST00000423948 1312 ntBASIC16.1■□□□□ 0.17
RNF6Q9Y252 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
RNF6Q9Y252 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 LYSMD4-203ENST00000378904 2122 ntBASIC16.1■□□□□ 0.17
RNF6Q9Y252 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF6Q9Y252 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RNF6Q9Y252 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 LINC02199-201ENST00000506655 2702 ntBASIC16.1■□□□□ 0.17
RNF6Q9Y252 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF6Q9Y252 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RNF6Q9Y252 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF6Q9Y252 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF6Q9Y252 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms