Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 TSSC2-201ENST00000450217 709 ntBASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 AL445228.2-201ENST00000605589 952 ntBASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 AC097374.2-201ENST00000618617 1306 ntBASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HHLA3Q9XRX5 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
HHLA3Q9XRX5 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HHLA3Q9XRX5 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
HHLA3Q9XRX5 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
HHLA3Q9XRX5 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HHLA3Q9XRX5 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HHLA3Q9XRX5 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.52□□□□□ -0.4
HHLA3Q9XRX5 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.52□□□□□ -0.4
HHLA3Q9XRX5 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HHLA3Q9XRX5 PAUPAR-201ENST00000630360 2965 ntBASIC12.52□□□□□ -0.4
HHLA3Q9XRX5 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.52□□□□□ -0.4
HHLA3Q9XRX5 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.52□□□□□ -0.4
HHLA3Q9XRX5 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
HHLA3Q9XRX5 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
HHLA3Q9XRX5 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
HHLA3Q9XRX5 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
HHLA3Q9XRX5 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 LINC01451-201ENST00000623792 534 ntBASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 KRT18P1-202ENST00000452408 1331 ntBASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 AC016734.2-201ENST00000624325 1377 ntBASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
HHLA3Q9XRX5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HHLA3Q9XRX5 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
HHLA3Q9XRX5 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
HHLA3Q9XRX5 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms