Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC10Q9NYD6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC10Q9NYD6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC10Q9NYD6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC10Q9NYD6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC10Q9NYD6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
HOXC10Q9NYD6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HOXC10Q9NYD6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXC10Q9NYD6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.38■□□□□ 0.69
HOXC10Q9NYD6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.38■□□□□ 0.69
HOXC10Q9NYD6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXC10Q9NYD6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXC10Q9NYD6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.38■□□□□ 0.69
HOXC10Q9NYD6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.38■□□□□ 0.69
HOXC10Q9NYD6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC10Q9NYD6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC10Q9NYD6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC10Q9NYD6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HOXC10Q9NYD6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 FO538757.1-201ENST00000623083 1397 ntBASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 MIR4492-201ENST00000581627 80 ntBASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 AC021097.1-201ENST00000607902 574 ntBASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
HOXC10Q9NYD6 AC016027.1-202ENST00000607927 1699 ntBASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 AC190387.1-201ENST00000551683 408 ntBASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 CYP2A7P1-201ENST00000595391 815 ntBASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms