Protein–RNA interactions for Protein: Q9NRG0

CHRAC1, Chromatin accessibility complex protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1Q9NRG0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRAC1Q9NRG0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
CHRAC1Q9NRG0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRAC1Q9NRG0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRAC1Q9NRG0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CHRAC1Q9NRG0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CHRAC1Q9NRG0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHRAC1Q9NRG0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRAC1Q9NRG0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRAC1Q9NRG0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 AP002414.1-201ENST00000391405 1147 ntBASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.17■□□□□ 0.34
CHRAC1Q9NRG0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 NCF1C-201ENST00000438382 1427 ntBASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 FGFR3P6-201ENST00000457012 610 ntBASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 SART3-203ENST00000546611 1184 ntBASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 AC008608.2-201ENST00000606089 416 ntBASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.16■□□□□ 0.34
CHRAC1Q9NRG0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.15■□□□□ 0.34
CHRAC1Q9NRG0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
CHRAC1Q9NRG0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHRAC1Q9NRG0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHRAC1Q9NRG0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRAC1Q9NRG0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CHRAC1Q9NRG0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHRAC1Q9NRG0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.15■□□□□ 0.34
CHRAC1Q9NRG0 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHRAC1Q9NRG0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHRAC1Q9NRG0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.15■□□□□ 0.34
CHRAC1Q9NRG0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.15■□□□□ 0.34
CHRAC1Q9NRG0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRAC1Q9NRG0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CHRAC1Q9NRG0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHRAC1Q9NRG0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRAC1Q9NRG0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRAC1Q9NRG0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRAC1Q9NRG0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms