Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 FLJ16779-201ENST00000612722 7638 ntBASIC15.23■□□□□ 0.03
NELFAQ9H3P2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 FDX1P1-201ENST00000449115 551 ntBASIC15.23■□□□□ 0.03
NELFAQ9H3P2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 RNPS1P1-201ENST00000507437 918 ntBASIC15.23■□□□□ 0.03
NELFAQ9H3P2 AC073648.2-201ENST00000510116 352 ntBASIC15.23■□□□□ 0.03
NELFAQ9H3P2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 RNA5SP419-201ENST00000515908 135 ntBASIC15.23■□□□□ 0.03
NELFAQ9H3P2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NELFAQ9H3P2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 AL139384.1-201ENST00000612143 3047 ntBASIC15.22■□□□□ 0.03
NELFAQ9H3P2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 ACTG1P4-201ENST00000425123 1122 ntBASIC15.22■□□□□ 0.03
NELFAQ9H3P2 RPS2P1-201ENST00000434010 821 ntBASIC15.22■□□□□ 0.03
NELFAQ9H3P2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NELFAQ9H3P2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms