Protein–RNA interactions for Protein: Q99707

MTR, Methionine synthase, humanhuman

Predictions only

Length 1,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTRQ99707 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
MTRQ99707 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
MTRQ99707 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
MTRQ99707 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MTRQ99707 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MTRQ99707 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.21■□□□□ 0.67
MTRQ99707 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.21■□□□□ 0.67
MTRQ99707 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTRQ99707 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTRQ99707 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTRQ99707 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MTRQ99707 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTRQ99707 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.21■□□□□ 0.67
MTRQ99707 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MTRQ99707 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTRQ99707 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MTRQ99707 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTRQ99707 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTRQ99707 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.21■□□□□ 0.67
MTRQ99707 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.21■□□□□ 0.67
MTRQ99707 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.21■□□□□ 0.67
MTRQ99707 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MTRQ99707 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
MTRQ99707 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.21■□□□□ 0.67
MTRQ99707 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.21■□□□□ 0.67
MTRQ99707 AL353135.1-201ENST00000606729 504 ntBASIC19.21■□□□□ 0.67
MTRQ99707 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTRQ99707 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MTRQ99707 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTRQ99707 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTRQ99707 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.21■□□□□ 0.67
MTRQ99707 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTRQ99707 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTRQ99707 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTRQ99707 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MTRQ99707 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
MTRQ99707 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
MTRQ99707 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTRQ99707 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MTRQ99707 AC090340.1-201ENST00000620778 4980 ntBASIC19.21■□□□□ 0.67
MTRQ99707 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.21■□□□□ 0.67
MTRQ99707 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.66
MTRQ99707 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.21■□□□□ 0.66
MTRQ99707 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MTRQ99707 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MTRQ99707 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
MTRQ99707 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MTRQ99707 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MTRQ99707 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MTRQ99707 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.2■□□□□ 0.66
MTRQ99707 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.2■□□□□ 0.66
MTRQ99707 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.2■□□□□ 0.66
MTRQ99707 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
MTRQ99707 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MTRQ99707 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MTRQ99707 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MTRQ99707 RNA5SP415-201ENST00000517246 115 ntBASIC19.2■□□□□ 0.66
MTRQ99707 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.2■□□□□ 0.66
MTRQ99707 AC106730.1-201ENST00000566722 1090 ntBASIC19.2■□□□□ 0.66
MTRQ99707 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MTRQ99707 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MTRQ99707 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MTRQ99707 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MTRQ99707 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
MTRQ99707 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.2■□□□□ 0.66
MTRQ99707 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MTRQ99707 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.2■□□□□ 0.66
MTRQ99707 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MTRQ99707 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MTRQ99707 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.19■□□□□ 0.66
MTRQ99707 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.19■□□□□ 0.66
MTRQ99707 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MTRQ99707 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.19■□□□□ 0.66
MTRQ99707 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MTRQ99707 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.19■□□□□ 0.66
MTRQ99707 PCDHB17P-201ENST00000539533 2393 ntBASIC19.19■□□□□ 0.66
MTRQ99707 AC104109.2-201ENST00000602919 1418 ntBASIC19.19■□□□□ 0.66
MTRQ99707 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MTRQ99707 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
MTRQ99707 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
MTRQ99707 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.19■□□□□ 0.66
MTRQ99707 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.19■□□□□ 0.66
MTRQ99707 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MTRQ99707 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.19■□□□□ 0.66
MTRQ99707 AC145285.3-201ENST00000564603 959 ntBASIC19.19■□□□□ 0.66
MTRQ99707 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MTRQ99707 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.19■□□□□ 0.66
MTRQ99707 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.19■□□□□ 0.66
MTRQ99707 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
MTRQ99707 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.19■□□□□ 0.66
MTRQ99707 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.19■□□□□ 0.66
MTRQ99707 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MTRQ99707 UBALD1-205ENST00000590891 2641 ntBASIC19.19■□□□□ 0.66
MTRQ99707 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
MTRQ99707 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MTRQ99707 ZNF259P1-201ENST00000407656 1365 ntBASIC19.19■□□□□ 0.66
MTRQ99707 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.19■□□□□ 0.66
MTRQ99707 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MTRQ99707 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MTRQ99707 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms