Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.04■□□□□ 0.48
CASD1Q96PB1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CASD1Q96PB1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CASD1Q96PB1 LINC00895-201ENST00000629028 1637 ntBASIC18.04■□□□□ 0.48
CASD1Q96PB1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.04■□□□□ 0.48
CASD1Q96PB1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CASD1Q96PB1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CASD1Q96PB1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CASD1Q96PB1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CASD1Q96PB1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CASD1Q96PB1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CASD1Q96PB1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CASD1Q96PB1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.04■□□□□ 0.48
CASD1Q96PB1 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.04■□□□□ 0.48
CASD1Q96PB1 AC134043.2-201ENST00000624206 2238 ntBASIC18.03■□□□□ 0.48
CASD1Q96PB1 RNF165-205ENST00000588679 2904 ntBASIC18.03■□□□□ 0.48
CASD1Q96PB1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CASD1Q96PB1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CASD1Q96PB1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.03■□□□□ 0.48
CASD1Q96PB1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CASD1Q96PB1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.03■□□□□ 0.48
CASD1Q96PB1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.03■□□□□ 0.48
CASD1Q96PB1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CASD1Q96PB1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CASD1Q96PB1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CASD1Q96PB1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CASD1Q96PB1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CASD1Q96PB1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CASD1Q96PB1 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CASD1Q96PB1 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
CASD1Q96PB1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CASD1Q96PB1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.03■□□□□ 0.48
CASD1Q96PB1 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.03■□□□□ 0.48
CASD1Q96PB1 AC092580.3-201ENST00000430932 139 ntBASIC18.03■□□□□ 0.48
CASD1Q96PB1 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.03■□□□□ 0.48
CASD1Q96PB1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.03■□□□□ 0.48
CASD1Q96PB1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.03■□□□□ 0.48
CASD1Q96PB1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.03■□□□□ 0.48
CASD1Q96PB1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.03■□□□□ 0.48
CASD1Q96PB1 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CASD1Q96PB1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CASD1Q96PB1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CASD1Q96PB1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CASD1Q96PB1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.03■□□□□ 0.48
CASD1Q96PB1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CASD1Q96PB1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CASD1Q96PB1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CASD1Q96PB1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CASD1Q96PB1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CASD1Q96PB1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.02■□□□□ 0.48
CASD1Q96PB1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.02■□□□□ 0.48
CASD1Q96PB1 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.02■□□□□ 0.48
CASD1Q96PB1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.02■□□□□ 0.48
CASD1Q96PB1 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CASD1Q96PB1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CASD1Q96PB1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.02■□□□□ 0.48
CASD1Q96PB1 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CASD1Q96PB1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CASD1Q96PB1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
CASD1Q96PB1 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.02■□□□□ 0.48
CASD1Q96PB1 AC015922.1-201ENST00000421102 1152 ntBASIC18.02■□□□□ 0.48
CASD1Q96PB1 AC142381.1-201ENST00000426099 345 ntBASIC18.02■□□□□ 0.48
CASD1Q96PB1 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.02■□□□□ 0.48
CASD1Q96PB1 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.02■□□□□ 0.48
CASD1Q96PB1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.02■□□□□ 0.48
CASD1Q96PB1 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CASD1Q96PB1 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CASD1Q96PB1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CASD1Q96PB1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.02■□□□□ 0.48
CASD1Q96PB1 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.02■□□□□ 0.48
CASD1Q96PB1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CASD1Q96PB1 AC021097.1-201ENST00000607902 574 ntBASIC18.02■□□□□ 0.48
CASD1Q96PB1 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.02■□□□□ 0.48
CASD1Q96PB1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CASD1Q96PB1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CASD1Q96PB1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.02■□□□□ 0.47
CASD1Q96PB1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CASD1Q96PB1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASD1Q96PB1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CASD1Q96PB1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CASD1Q96PB1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASD1Q96PB1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.01■□□□□ 0.47
CASD1Q96PB1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASD1Q96PB1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASD1Q96PB1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.01■□□□□ 0.47
CASD1Q96PB1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASD1Q96PB1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASD1Q96PB1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.01■□□□□ 0.47
CASD1Q96PB1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.01■□□□□ 0.47
CASD1Q96PB1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASD1Q96PB1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASD1Q96PB1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASD1Q96PB1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CASD1Q96PB1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASD1Q96PB1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASD1Q96PB1 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASD1Q96PB1 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.01■□□□□ 0.47
CASD1Q96PB1 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CASD1Q96PB1 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CASD1Q96PB1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms