Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM11Q96F44 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
TRIM11Q96F44 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM11Q96F44 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM11Q96F44 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM11Q96F44 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM11Q96F44 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM11Q96F44 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM11Q96F44 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM11Q96F44 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRIM11Q96F44 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM11Q96F44 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRIM11Q96F44 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
TRIM11Q96F44 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
TRIM11Q96F44 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM11Q96F44 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM11Q96F44 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM11Q96F44 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM11Q96F44 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.03■□□□□ 0.48
TRIM11Q96F44 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM11Q96F44 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM11Q96F44 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM11Q96F44 NKAPP1-205ENST00000585790 367 ntBASIC18.03■□□□□ 0.48
TRIM11Q96F44 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM11Q96F44 AL732292.2-201ENST00000609649 430 ntBASIC18.03■□□□□ 0.48
TRIM11Q96F44 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM11Q96F44 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM11Q96F44 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM11Q96F44 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRIM11Q96F44 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM11Q96F44 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM11Q96F44 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM11Q96F44 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM11Q96F44 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM11Q96F44 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRIM11Q96F44 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TRIM11Q96F44 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM11Q96F44 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM11Q96F44 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM11Q96F44 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM11Q96F44 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM11Q96F44 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM11Q96F44 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM11Q96F44 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM11Q96F44 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM11Q96F44 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM11Q96F44 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM11Q96F44 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM11Q96F44 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM11Q96F44 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM11Q96F44 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM11Q96F44 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TRIM11Q96F44 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
TRIM11Q96F44 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM11Q96F44 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM11Q96F44 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM11Q96F44 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM11Q96F44 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM11Q96F44 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TRIM11Q96F44 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM11Q96F44 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.02■□□□□ 0.48
TRIM11Q96F44 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.02■□□□□ 0.48
TRIM11Q96F44 KRT18P31-201ENST00000506277 1292 ntBASIC18.02■□□□□ 0.48
TRIM11Q96F44 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM11Q96F44 TERC-201ENST00000602385 541 ntBASIC18.02■□□□□ 0.48
TRIM11Q96F44 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.02■□□□□ 0.48
TRIM11Q96F44 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM11Q96F44 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
TRIM11Q96F44 AC243591.1-201ENST00000452967 1364 ntBASIC18.02■□□□□ 0.47
TRIM11Q96F44 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM11Q96F44 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM11Q96F44 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.02■□□□□ 0.47
TRIM11Q96F44 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM11Q96F44 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.02■□□□□ 0.47
TRIM11Q96F44 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM11Q96F44 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TRIM11Q96F44 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM11Q96F44 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM11Q96F44 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM11Q96F44 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TRIM11Q96F44 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM11Q96F44 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM11Q96F44 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM11Q96F44 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM11Q96F44 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM11Q96F44 KRT8P49-201ENST00000604166 1432 ntBASIC18.01■□□□□ 0.47
TRIM11Q96F44 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM11Q96F44 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM11Q96F44 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM11Q96F44 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM11Q96F44 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM11Q96F44 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.01■□□□□ 0.47
TRIM11Q96F44 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM11Q96F44 MTDHP3-201ENST00000594186 672 ntBASIC18.01■□□□□ 0.47
TRIM11Q96F44 AL139424.1-201ENST00000607572 797 ntBASIC18.01■□□□□ 0.47
TRIM11Q96F44 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM11Q96F44 AL355877.3-201ENST00000622820 899 ntBASIC18.01■□□□□ 0.47
TRIM11Q96F44 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.01■□□□□ 0.47
TRIM11Q96F44 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM11Q96F44 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms